| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0357 |
|---|
| Symbol | |
|---|
| ID | 4902515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 329440 |
|---|
| End bp | 330399 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640133587 |
|---|
| Product | 2-nitropropane dioxygenase family oxidoreductase |
|---|
| Protein accession | YP_001064640 |
|---|
| Protein GI | 126454748 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGC CCGCCGTCCT GCAAAACCTC GCGCTGCCCG TCATCGCATC GCCGATGTTC
ATCGTCAGCT ATCCGGAGCT CGTGCTCGCG CAATGCAAGG CGGGCATCGT CGGCTCGTTT
CCCGCGCTCA ACGCGCGCCC GGCCGAATTG CTCGACGAAT GGCTCACGCA GTTGCAGACG
CAGCTCGCCG AGCACAAGGC CGCGAACCCG GACGCCGTGA TCGGGCCGAT CGCCGTGAAT
CAGATCGTCC ATCAGTCGAA CGTGCGGCTC GAGCAGGACA TCCGCGTATG CGTCGAGCAC
AAGGTGCCGA TCTTCATCAC GAGCCTGCGC GCGCCGGCGC GCGAGATCGT CGATGCGGTG
CACGGCTACG GCGGCATCGT GCTGCATGAC GTGATCAACC TGCGGCACGC GCAGAAAGCG
CTCGAAGCGG GCGTCGACGG CCTCATCCTC GTCGCCGCGG GCGCGGGCGG CCACGCGGGC
ACGACCTCGC CGTTCGCGCT CGTCGGCGAA GTGCGCAGGA TCTTCGACGG CCCGATCGTG
CTGTCCGGCT CGATCGCGAA CGGCGGCTCG ATCCTTGCCG CGCAGGCGAT GGGCGCCGAT
CTCGCCTACA TGGGCACGCG CTTCATCGCG ACGCAGGAAG CGCACGCGGT GGACGCGTAC
AAGCGCGCGA TCCTCGAGGC GAAATCGGCC GACATCATCT ACACGAACCT CTTCACCGGC
GTGCACGGCA ACTACATCCG CGAGAGCATC GTGAACGCGG GGCTCGACCC GGACGCGCTG
CCCGAATCCG ACAAGACGAA GATGAATTTC GGCGGCGACA AGGCGAAGGC GTGGAAGGAC
ATCTGGGGCG CGGGCCAGGG CGTCGGGCTG ATGGATGACG TTCCGAGCGT TGCGGAGCTC
GTCGCGCGGC TCAAGCGCGA GTACGACGAC GCGAAGGCGC GCCTGGGGAT TCGCGCGTAG
|
|---|
| Protein sequence | MALPAVLQNL ALPVIASPMF IVSYPELVLA QCKAGIVGSF PALNARPAEL LDEWLTQLQT
QLAEHKAANP DAVIGPIAVN QIVHQSNVRL EQDIRVCVEH KVPIFITSLR APAREIVDAV
HGYGGIVLHD VINLRHAQKA LEAGVDGLIL VAAGAGGHAG TTSPFALVGE VRRIFDGPIV
LSGSIANGGS ILAAQAMGAD LAYMGTRFIA TQEAHAVDAY KRAILEAKSA DIIYTNLFTG
VHGNYIRESI VNAGLDPDAL PESDKTKMNF GGDKAKAWKD IWGAGQGVGL MDDVPSVAEL
VARLKREYDD AKARLGIRA
|
|---|
| |