| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0331 |
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| Symbol | |
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| ID | 4900449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 304420 |
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| End bp | 305991 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640133561 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001064614 |
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| Protein GI | 126452324 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG0845] Membrane-fusion protein
[COG5569] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.957664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCATA TTCGCTTGAC CCGCGCGGCG CTGGCCGTGC TTGCCGCCGT CGCGCTGTCC
GCGGCCGGCT ACTTCGCCGG CGCTCGCTTC GGCGCGCATG TCGACGTCGC GCATCGCGCG
CACGCCACGA ACACCACGAA CGCCGTCGAC GGAGCCGATG CGAAGCCGGG CAGAAAAGTG
CTGTACTGGC GCGATCCGAT GGTGCCGAAC CAGCATTTCG ACAAGCCCGG CCCGTCGCCG
TTCATGGACA TGCCCCTCGA ACCCGTCTAT GCGGACGACG GCGGCGGCGC GCCGGGCGTG
CGCATCGATC CCGGCCTGCA ACAGAACCTC GGCATCCGCT ATGCGAAGGT GCGGCGGCGT
GACGTCGACG AAGGCTTCGA CGCGGTCGGC ACGACGCAAT TCGACGAGTC GCGCACGGCC
GTCGTGCAAT CGCGCGTGAC CGGTTATGTC GACCGGTTGT ACGCGAGCGC GCCGTTGCAG
CGCATCGCGA AGGGCGCGCC GATCGCCTCG CTGTTCGTGC CCGACTGGCT CGCGCCGCAG
GAGGAATATC TCGCGCTCAA GCGCGGCGCG ATGGACGAGG CGCTGCTTGC CGCTTCGCGT
GCGCGGATGC GCGCGCTATC GATTCCCGAT AGCGTGATCG CGAATCTCGA CCGGACAGGC
CGCGCGCAGA CGCATATCGT GCTCGCCTCG CCGGAGACGG GCGTCGTCAG CGAGCTGAAC
GTGCGCGACG GCGCGATGGT GACGCCCGGG CAGACGCTCG CGAAGATCGC GGGGCTGTCG
ACGCTGTGGG CCGTCATCGA CGTGCCGGAG GCGCTCGCGT CCGGCGTGCG TCCCGGCATG
CGCGTCGACG CGACATTCGA GGGCGACCCG CAGCGGCGCG TGAGCGGCGC GATTCGCGAG
ATCCTGCCGG GCGTGAACGC GACGACGCGC ACGCTGCAGG CGCGGCTCGA GCTCGACAAT
CGCGCGCTCG CGCTCACGCC GGGCATGCTG ATGCGCGCGC GCGTCGGCGC ATCGCATGCG
GCGTCGCGGC TCGTCGTGCC GTCCGATGCG GTGATCGCGA CGGGCAAGCG CTCGGTCGTG
ATCGTCAGGA CGGCGGACGA TCGGTTGCGG CCGGCGGACG TGACGGTCGG CCGCGATGCC
GGAGACGAAA CCGAGGTGCT GGCCGGGCTC GAAGAAGGCG AAACGGTCGT CGCGTCCGGC
CAGTTCCTGA TCGATTCCGA GGCGAGCCTG AAATCGGTGC TGCCGCGCCT CGAAGCCGAC
GCATCCGGCG CGCTCGCCGC GCGTGCGACG CGGCCGCCGG CGCGATCATC GCCGCCGGCT
GCGCAGGCGG GCGGTGCCGC GCCGGTCTAC GAAACCACCG GCAAGGTGGA GAAGATCACC
GCGGCCGACA TCACGTTCTC GCATCAGCCG GTGCCGGCGC TCGGCTGGGG CGCGATGACG
ATGTCGTTCG ACAAGCCCGC GCCCGCCGCG TTCGCGAACG TGAAGGCGGG TGACACGGTG
CGCTTCGCGT TCGAGGCGAG CGGCGACGGC TATCGGCTGA CGAAGGTCGA ACCGGTCGGA
GGCGCCCGAT GA
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| Protein sequence | MNHIRLTRAA LAVLAAVALS AAGYFAGARF GAHVDVAHRA HATNTTNAVD GADAKPGRKV
LYWRDPMVPN QHFDKPGPSP FMDMPLEPVY ADDGGGAPGV RIDPGLQQNL GIRYAKVRRR
DVDEGFDAVG TTQFDESRTA VVQSRVTGYV DRLYASAPLQ RIAKGAPIAS LFVPDWLAPQ
EEYLALKRGA MDEALLAASR ARMRALSIPD SVIANLDRTG RAQTHIVLAS PETGVVSELN
VRDGAMVTPG QTLAKIAGLS TLWAVIDVPE ALASGVRPGM RVDATFEGDP QRRVSGAIRE
ILPGVNATTR TLQARLELDN RALALTPGML MRARVGASHA ASRLVVPSDA VIATGKRSVV
IVRTADDRLR PADVTVGRDA GDETEVLAGL EEGETVVASG QFLIDSEASL KSVLPRLEAD
ASGALAARAT RPPARSSPPA AQAGGAAPVY ETTGKVEKIT AADITFSHQP VPALGWGAMT
MSFDKPAPAA FANVKAGDTV RFAFEASGDG YRLTKVEPVG GAR
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