Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0330 |
Symbol | |
ID | 4901156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 303108 |
End bp | 304409 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640133560 |
Product | outer membrane efflux protein |
Protein accession | YP_001064613 |
Protein GI | 126455001 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTCGA TGCTTCGCGC GCCGCACGGC CGGCGTGCGC GCCTGCACGC GCGCACGCTC GTCGCGGCGC TCACTTTCGC GAACGCCGCC GCCGCGTTCG CCCAATCGGC GCCGCTCACG CTCGACGCCG CGCTGCAATC GGCCGCCGAC CGATCGGCGG CGATGCAGGC GGCGCAGGCG TCCGTCCAGG CGAGCGCCGA GCTCGCCGTC AAGGCCGGGC AATTGCCCGA TCCGATGCTG AAGGCCGGCA TCGACAATCT GCCCGTCGAC GGCCCGCAAC GCTTCACGAT CGGCCAGGAA TCGATGACGA TGCGCCGCAT CGGCATCGCG CAGGAGTGGG TGTCGGGCGA CAAGCGCCGG CTGCGCACCG CGCTCGCGAA CGAAGTCGTC GGCCGCGAAC GCGCCGGCTA TCTCGCGCAA CTCGCGGACG TTCGCCGGCA GACGGCCATC GCGTGGCTTG ACGCCGCATA CGCGAAGAAG GCGCTCGCGC TGCAGCGCGA ACTCGCCGAC GAGATGAACC GCGAGCTCGC CGCGACGCAG GCCGCGTATC GCGGCGCGAA GGCGACGGCC GCCGACGCCC TGCAGGCGCG CGCGCTGCTC GCGCAGGCGC GCGACCGGCA AGCGAACGCC CGCCAGGCGT TCGACACCGC GCTGATCGGC CTGTCTCGCT GGGTTGCCGC GCCGACACTC GACGTGGCGG GCGAGCCGCC CGCGCCGGTG TCGTTCGTGC CGTCGCTGCC GCCCGACGAG CTGCGCCGTG TGCAGCCGAC GCTGATCGCG GCCGACGAGG ACGTGGAGGT GGCCGACGCC GACGTCGCGC TCGCCGCGAG CGAGCGGCGT CCGAACTGGA CGTGGGAGAT CGCGTATCAG CAGCGCGGCG CGCCGTACGC GAACATGGTG TCGATCGGCG TCACGATTCC GCTGCCGCTC GATCGGCGCG ATCGGCAGGA CCGCGACGTC GCGCAAAAGC GCGCGCTCGC CACGAAGGCG CGGCTGATGT ACGAGGATGC GCGGCGTCAG GTCGACGCGG ATATCCGCAC GCAATCGGCG ACGCTCGAGA GCGGCCGCGC GCGGCTCGCG GAGCTCGGGC GAGCGCTGCT GCCCGCGGCC GACGAGCGCG TGCGCCTTGC CGACGCCGCG TACCGCGCGG GCGCGGGCTC GCTCGCCGAC GCGTTCGCCG CGCGTCGCGC GCGGCTCGAT GCGCGGCTCC AGGTGCTCGA TCTCGAACGC GACGTCGCGC GAGCGTGGGC GCAGCTCGAC TATCAGATCG TCCCGTCGGC GATGCTCGCC GCCGCACAGT GA
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Protein sequence | MYSMLRAPHG RRARLHARTL VAALTFANAA AAFAQSAPLT LDAALQSAAD RSAAMQAAQA SVQASAELAV KAGQLPDPML KAGIDNLPVD GPQRFTIGQE SMTMRRIGIA QEWVSGDKRR LRTALANEVV GRERAGYLAQ LADVRRQTAI AWLDAAYAKK ALALQRELAD EMNRELAATQ AAYRGAKATA ADALQARALL AQARDRQANA RQAFDTALIG LSRWVAAPTL DVAGEPPAPV SFVPSLPPDE LRRVQPTLIA ADEDVEVADA DVALAASERR PNWTWEIAYQ QRGAPYANMV SIGVTIPLPL DRRDRQDRDV AQKRALATKA RLMYEDARRQ VDADIRTQSA TLESGRARLA ELGRALLPAA DERVRLADAA YRAGAGSLAD AFAARRARLD ARLQVLDLER DVARAWAQLD YQIVPSAMLA AAQ
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