| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0309 |
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| Symbol | oprB |
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| ID | 4901939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 285506 |
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| End bp | 287020 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640133539 |
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| Product | carbohydrate porin |
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| Protein accession | YP_001064592 |
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| Protein GI | 126454499 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA AGACCCTCCA TCAAATGCTC GTCAAATCCG GCGTCGCCTC CGGCCTGCCG
TTGTTGCTGT CGCTCGGCAT CGTGCAGCCC GCGCTCGCGC AGGCGCCGAG CCCCGCGGCG
GCCCCCGCCG AGAACGCCGC GCCGCCGGCA CCCGCCACGC GGGCCCCGGA TGGCGTGCCC
GGCGGAAACG GCGCGACAGC CGCGCAGACG GATGCCGCCC CCACCGGCTT CTGGGATCGC
TCGAACCTGT TCGGCGACAT GGGCGGCCTG CGCACCAAGC TCGGCGATCA CGGGATCACG
CTGAATCTGC AGGAAACGAG CGAGTACCTG CGCAACCTGT CGGGCGGCAC AAGCCGCGGC
GGCGCCTATG ACGGCCTCAC GCAATTCGGC TTCAGCGTCG ACACCGAAAA GGCGATCGGG
CTGCCGGGCG GCACGTTCAA CGTGTCGGGC CTGCAGATTC ACGGCACGAG CCTCACGGCG
CGCAACCTGC AGTTGCTGCA GACGGCAAGC GGCATCGAGG CCGAGGCCAC GACGCGCCTC
TGGGAGCTGT GGTACCAGCA GTCGTTCGCG AACGGCCGCG CCGACGTGAA GGTCGGCCAG
CAAAGCCTCG ACCAGGAATT CATGGTGAGC CAGTACGCGA GCACGTTCAT CAACGCGACG
TTCGGCTGGC CCGTGCTGCC CGCCGTCGAC ATGCCGGCGG GCGGCCCCGC CTATCCGCTG
TCGTCGCTCG GCGTGCGGCT GCGCGCGAAG CCATCCGATG CATGGACCGT GATGGCGGGC
GTGTTCGACG GCAATCCGGC GGGCGGCGTG GGCGACGCGC AACAGCTCAA TCGGCACGGC
ACGAATTTCA ACCTGCGCAA CGGCGCGCTC TTCATCGGCG AGCTCCAGTA CGCGCTCAAC
GCGCCGCCCG CCGATCCGAA GGCGCCGCAG GCGGGGCTGC CCGGCATGTA CAAGCTCGGC
GTCTGGTACA ACTCCGAGCG CTTCGCCGAT CCGCGCTACG ACACGAACGG CGTGCCGCTC
GCCGATCCGG CGAGCAACGG CGTCGCGGCG ACGCATCGCG GCAACTACGG CTTCTATGCG
GTCGCGGACC AGATGGTATG GCGGCCGGGC GCGGACAGCC CGCGCTCGCT GAACGTGTTC
GCGCGCGTGA TGGGCGCGCC CGGCGATCGC AACGCCGTCG ACTTCACGCT GAACGCGGGC
GTCACGCTCA AGGCGCCGTT CGCAGGACGC GACAACGACA CGGCGGGGCT TGCCGTCAGC
TACGCGAAGA TCGGTTCGCG CGCGCGCGGC GCCGACGGCG ACACCGGCGT GTTCCAGACG
CCCGGCTATC CGGTGCGCCG CGCGGAAACG CTGATCGAGG CGACCTACCA GTATCAGGTG
ACGCCGTGGT GGCAACTGCA GGGGGATTTC CAGTACGCAT TCCGGCCGGG CGGCGGCATT
CCGAACCCGA ACGAGCCGGG CTCGCGTATC GGCAACGAAG CGATCGTCGG CGTACGCACG
ACGATCACGT TCTGA
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| Protein sequence | MKKKTLHQML VKSGVASGLP LLLSLGIVQP ALAQAPSPAA APAENAAPPA PATRAPDGVP
GGNGATAAQT DAAPTGFWDR SNLFGDMGGL RTKLGDHGIT LNLQETSEYL RNLSGGTSRG
GAYDGLTQFG FSVDTEKAIG LPGGTFNVSG LQIHGTSLTA RNLQLLQTAS GIEAEATTRL
WELWYQQSFA NGRADVKVGQ QSLDQEFMVS QYASTFINAT FGWPVLPAVD MPAGGPAYPL
SSLGVRLRAK PSDAWTVMAG VFDGNPAGGV GDAQQLNRHG TNFNLRNGAL FIGELQYALN
APPADPKAPQ AGLPGMYKLG VWYNSERFAD PRYDTNGVPL ADPASNGVAA THRGNYGFYA
VADQMVWRPG ADSPRSLNVF ARVMGAPGDR NAVDFTLNAG VTLKAPFAGR DNDTAGLAVS
YAKIGSRARG ADGDTGVFQT PGYPVRRAET LIEATYQYQV TPWWQLQGDF QYAFRPGGGI
PNPNEPGSRI GNEAIVGVRT TITF
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