| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0257 |
|---|
| Symbol | dppB |
|---|
| ID | 4900725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 240025 |
|---|
| End bp | 241035 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640133487 |
|---|
| Product | dipeptide ABC transporter, permease protein DppB |
|---|
| Protein accession | YP_001064540 |
|---|
| Protein GI | 126455063 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0183254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGAT TCGTCTTGCG CCGCGTGGGC ATGGTGATCC CGACCTTCAT CGGCATCACG
GTGCTCGCGT TCGCGCTGAT CCACCTGATA CCGGGCGACC CCATCGAAGT GATGATGGGC
GAGCGCGGCG TCGATCCGAC GATGCACGCG CAAGCGCTGC ACCGCCTCGG GCTCGACGAG
CCGCTTCCCA TGCAATATCT GCACTACGTC GGCCGCGCGC TGCACGGCGA CCTGGGCACG
TCGATCATCA CCAACACGAG CGTGATGGGC GAGTTCCTCG CGCGCTTTCC GGCGACGGTC
GAGCTGTCGC TCTGCGCGCT CGCGTTCGCG CTCGCGCTCG GGCTGCCGGC CGGCGTGTTC
GCCGCGCTCA GGCGCGGCAC GATCGTCGAT CACGGCGTGA TGGGTACGGC GCTCACCGGC
TATTCGATGC CGATCTTCTG GTGGGGGCTC ATCCTCATCA TGGTGTTCTC GGCGACGCTC
GGCTGGACGC CCGTGTCGGG CCGCATCGCG GTGGAATACG AGATTCCTCA TACGACGGGC
TTCATGCTGA TCGACACGCT GCTCTCCGGC GAGGAGGGCG CGTTCGCGTC GGCGGTGAGC
CACCTGATCC TGCCCGCGAT CGTGCTCGGC ACGATCCCGC TCGCGGTGAT CGCGCGGATG
ACGCGTTCGT CGATGCTCGA AGTGCTGCGC GAGGATTACA TCCGCACCGC GCGCGCGAAG
GGGCTGTCGC CCGCGCGCAT CGTCGTCGTG CATGCGCTGC GCAATGCGCT GATTCCGGTC
GTCACGGTGA TCGGCCTGCA GGTCGGCACG CTGCTCGCGG GCGCCGTGCT CACCGAGACA
CTGTTCTCGT GGCCGGGTGT CGGCAAGTGG CTGATCGACG CGATCGGCCG CCGCGACTAT
CCGGTCGTGC AAGGCGGCAT CCTGATGATC GCGACGCTCG TGATCGTCGT GAACCTGGTC
GTCGATCTGC TGTACGGCGT GCTGAATCCG CGCATTCGCC ATACGAGGTA A
|
|---|
| Protein sequence | MFRFVLRRVG MVIPTFIGIT VLAFALIHLI PGDPIEVMMG ERGVDPTMHA QALHRLGLDE
PLPMQYLHYV GRALHGDLGT SIITNTSVMG EFLARFPATV ELSLCALAFA LALGLPAGVF
AALRRGTIVD HGVMGTALTG YSMPIFWWGL ILIMVFSATL GWTPVSGRIA VEYEIPHTTG
FMLIDTLLSG EEGAFASAVS HLILPAIVLG TIPLAVIARM TRSSMLEVLR EDYIRTARAK
GLSPARIVVV HALRNALIPV VTVIGLQVGT LLAGAVLTET LFSWPGVGKW LIDAIGRRDY
PVVQGGILMI ATLVIVVNLV VDLLYGVLNP RIRHTR
|
|---|
| |