| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0256 |
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| Symbol | dppA |
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| ID | 4899380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 238285 |
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| End bp | 239913 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640133486 |
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| Product | dipeptide ABC transporter, periplasmic dipeptide-binding protein DppA |
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| Protein accession | YP_001064539 |
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| Protein GI | 126454101 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACATA ACCGTCTGTT GCGCGCACTG CGTGCTACCG CCATCGCGGG CGTTGCAGCG
GCATCGTTCG GCATCGCGGG TTCTGCATTC GCACAGATCC CGAACAAAAC GCTCGTCTAC
TGCTCAGAAG GCAGCCCGGC GGGCTTCGAT TCCGCGCAAT TCACGACGGG CGTCGATTTC
ACCGCGTCGA CGTTCCCGAT CTACAACCGC CTCGTCGAAT TCGAGCGCGG CGGCACGAAG
GTCGAGCCGG GCCTCGCCGA GAAGTGGGAC ATCTCGGCCG ACGGCAAGGT CTACACGTTC
CATCTGCGCC ACGGCGTCAA GTTCCATACG ACCGATTTCT TCAAGCCCAC GCGCGAATTC
AACGCGGACG ACGTCGCGTT CACGTTCGAG CGGATGCTCG ATCCGAATCA GGCGTTTCGC
AAGGCGTACC CGGTGTCGTT CCCGTACTTC ACCGACATGG GCCTCGACAA GCTGATCGTG
AAGATCGAGA AGCTCGATCC GTACACGGTC CGCTTCACGC TGAAGGAGCC GAACGCGCCG
TTCATCCAGA ACCTCGCGAT GGAATTCGCG TCGATCCTCT CGGCCGAATA CGCGGACCAA
CTGATGAAGG CGGGCAAGGC GGCCGACATC AACCAGAAGC CGATCGGCAC GGGCCCGTTC
ATCTTCCGCA GCTACACGAA GGACGCGACG ATCCGCTTCG ACGGCAATCC TGATTATTGG
AAGAAGGGCG CGGTGAAGAT CTCGAAGCTG ATCTTCTCGA TCACGCCCGA CCCGGGCGTG
CGCGTGCAGA AGATCAAGCG CAACGAGTGC CAGGTGATGA GCTATCCGCG GCCCGCGGAC
ATCGCGACGC TGAAGGCCGA TTCGAACGTC GACATGCCGT CGCTGCCGGG CTTCAACCTC
GGCTACCTCG CGTACAACGT GCAGCACAAG CCCGTCGACA AGCTCGAAGT GCGCCAGGCG
CTCGACATGG CGATCAACAA GAAGGCGATT CTCGAATCCG TCTATCAGGG CGCGGGCCAG
GCGGCGAGCG CGCCGATGCC GCCGACCCAA TGGTCGTACG ACAAGAACCT GAAGGCCGCC
GCCTACGATC CGGCGAAGGC GAAGGCGCTG CTCGCGAAGG CGGGCTACCC GAACGGCTTC
CCGATCACGC TGTGGGCGAT GCCCGTGCAG CGCCCGTACA ACCCGAACGC GAAGCTGATG
GCCGAGATGA TCCAGGCCGA CTGGGCGAAG ATCGGCGTGC AGGCGAAGAT CGTCACGTAC
GAGTGGGGCG AGTACATCAA GCGCGCGCAT GCGGGCGAGC ACGATACGAT GCTGATCGGC
TGGAACGGCG ACAACGGCGA TCCCGACAAC TGGCTCGGCA CGCTGCTCGG CTGCGAGGCG
GTCAAGGGCA ACAACTTCTC CGAGTGGTGC TACAAGCCGT TCGACGAGCT GATCCAGAAG
GGCCGCGTGA CGACGTCGCA GGACGGCCGC ACGAAGATCT ACATGCAGGC GCAGCAGATC
TTCGCGCAGC AACTGCCGTT CTCGCCGATC GCGAACTCGA CCGTCTATCA GCCGGTGCGC
AAGAACATCG TCGACATGCG GATCGAGCCG CTCGGCTATG CGCGCTTCGA CGGCGTCAGC
GTGAAATAA
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| Protein sequence | MEHNRLLRAL RATAIAGVAA ASFGIAGSAF AQIPNKTLVY CSEGSPAGFD SAQFTTGVDF
TASTFPIYNR LVEFERGGTK VEPGLAEKWD ISADGKVYTF HLRHGVKFHT TDFFKPTREF
NADDVAFTFE RMLDPNQAFR KAYPVSFPYF TDMGLDKLIV KIEKLDPYTV RFTLKEPNAP
FIQNLAMEFA SILSAEYADQ LMKAGKAADI NQKPIGTGPF IFRSYTKDAT IRFDGNPDYW
KKGAVKISKL IFSITPDPGV RVQKIKRNEC QVMSYPRPAD IATLKADSNV DMPSLPGFNL
GYLAYNVQHK PVDKLEVRQA LDMAINKKAI LESVYQGAGQ AASAPMPPTQ WSYDKNLKAA
AYDPAKAKAL LAKAGYPNGF PITLWAMPVQ RPYNPNAKLM AEMIQADWAK IGVQAKIVTY
EWGEYIKRAH AGEHDTMLIG WNGDNGDPDN WLGTLLGCEA VKGNNFSEWC YKPFDELIQK
GRVTTSQDGR TKIYMQAQQI FAQQLPFSPI ANSTVYQPVR KNIVDMRIEP LGYARFDGVS
VK
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