| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0220 |
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| Symbol | |
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| ID | 4901384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 205489 |
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| End bp | 206778 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640133450 |
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| Product | major facilitator family transporter |
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| Protein accession | YP_001064503 |
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| Protein GI | 126455134 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTGTAC CACCCGGCGC GCCGCGGCCC GCCGCCGCCG GCCGAGCGAA CTCGGCGCAT
GCCGCGCAAG GCGCGTCGCC CGTCGGCGCC GCCCCATATC TCGAGCGCGG CTCACGCGGT
TACTGGCACG CGAGCGTCGC GCTGCTGTTC GCCGGTTACG CGACGTTCTC GCTGCTCTAT
TACGTGCAGC CGCTGTTGCC GGAATTCTCG AAGGCATTCG GCGTGAGCCC CGCGCAGAGC
AGTCTCGCGC TGTCGTTCGC GACGGCCGCG CTCGCCGCCG CCGTGTTCGT CGCCGGCTTC
GTCTCCGAAG CGTTGAGCCG CCACCGGCTG ATGACGGCTT CGCTCACCGC TTCGTCGCTG
CTCACGCTCG CCGCCGCATT CGCGCCGCAC TGGCATCAAC TACTGATCCT GCGCGCGCTC
ACGGGGCTCG CGCTCGGCGG CGTGCCCGCC GTCGCGATGG CGTATCTCGC CGAAGAAGTG
CACCCGGACG GGCTCGGACT CGCGATGGGG CTCTATGTCG GCGGCACCGC GATCGGCGGG
ATGGCGGGGC GCGTGATCAC CGGCATTCTC ACCGACCTGT TCTCGTGGCG CATCGCGGTG
GGCGCGATCG GCGTGCTCGG CCTCGCGTCG ATGCTCGCGT TCCGCATGCT GCTGCCGCCG
TCGCGCCATT TCGTGCCGCG CCGCGGCCTG AACCTCGCGC ATCACCGCAC GTCGCTCGCC
CATCATCTCC GCGGCCAGCG CGAGCTGCCC GTGCTGTTCG CGATGGCGTT CGTGCTGATG
GGCAGCTTCG TCACGCTCTA CAACTACATC GGCTATCGGC TGCTCGCGCC GCCGTATTCG
ATGGGGCAGG CGACGATCGG CGCGATCTTC GTCGTCTATC TGGTGGGCGT CGTCGCATCC
CCGCTGTCGG GACGGCTCGC CGATACGCTC GGCCGCGGCC GCGTGCTGAT CGCGAGCCTC
GCGGTGATGC TCGGGGGCGT CGCGCTGACG CTGCTGCATC CGGTTGCCGC GATCGTCGCG
GGCGTCGCAT GCGTGACGTT CGGCTTCTTC GCGGGCCACG CGGTCGCGAG CGGCTGGGTC
GGCCGGCTCG CGCAGCACGG CAAAGGCCAG GCGGCCGCGC TCTATCTACT CGCTTACTAT
CTTGGCTCGA GCGTCGTCGG CTCGCTCGGC GGACGCTTCT GGAGCACGCT CGGCTGGCCG
GGCGTCGCGG CGCTCGTCGG CGCGCTGCTC GCGCTCGGCG TGGTCGCGGC CGCCTGGCTG
CGCGCGCGCG AGCGCGGCGG CGCCGCGTGA
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| Protein sequence | MTVPPGAPRP AAAGRANSAH AAQGASPVGA APYLERGSRG YWHASVALLF AGYATFSLLY
YVQPLLPEFS KAFGVSPAQS SLALSFATAA LAAAVFVAGF VSEALSRHRL MTASLTASSL
LTLAAAFAPH WHQLLILRAL TGLALGGVPA VAMAYLAEEV HPDGLGLAMG LYVGGTAIGG
MAGRVITGIL TDLFSWRIAV GAIGVLGLAS MLAFRMLLPP SRHFVPRRGL NLAHHRTSLA
HHLRGQRELP VLFAMAFVLM GSFVTLYNYI GYRLLAPPYS MGQATIGAIF VVYLVGVVAS
PLSGRLADTL GRGRVLIASL AVMLGGVALT LLHPVAAIVA GVACVTFGFF AGHAVASGWV
GRLAQHGKGQ AAALYLLAYY LGSSVVGSLG GRFWSTLGWP GVAALVGALL ALGVVAAAWL
RARERGGAA
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