Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0177 |
Symbol | rodA |
ID | 4900805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 165022 |
End bp | 166170 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640133407 |
Product | rod shape-determining protein RodA |
Protein accession | YP_001064460 |
Protein GI | 126453176 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0772] Bacterial cell division membrane protein |
TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.365127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTCG ACAAGCGCGC CTCGCTCGAC AAGATCAAGC AGATGTTCGC GGGCTTCGAC CGGCCGCTCG CGCTCATCGT GTTCCTGCTG CTGTGCGTCG GCATCGTCAC GCTGTACAGC GCGAGCGTCG ACGTGCCGGG GCGCGTCGAG GACCAGTTGC GCAACATCAT GCTGACGTTC GTGCTGATGT GGGTGATCGC GAACATCCCG CCGCAAACGC TGATGCGCTT CGCGGTGCCG CTCTATTCGT TCGGCGTCGC GCTGCTCGTC GCGGTGGCGC TATTCGGCAT GACGAAGAAG GGCGCGAAGC GCTGGCTGAA CGTCGGCGTC GTGATCCAGC CGTCCGAGAT CCTCAAGATC GCGACGCCGC TGATGCTCGC GTGGTACTAC CAGCGGCGCG AAAGCAGCCT GCGCTGGTAC GACTTCGTCG TCGCGTTCGC CATCCTGATG GTGCCCGTCG GGCTGATCGC GAAACAGCCG GATCTCGGCA CCGCCGTGCT CGTGTTCGCC GCGGGCCTGT TCGTGATCTA TCTCGCGGGG CTGTCGTTCA AGCTGATCGT GCCGGTGCTC GTCGCCGGCG TGCTCGCGGT CGGCTCGATC GCCGTGTTCG AGGAGCGCAT CTGCCAGCCC GAAGTCGTCT GGCCGCTGAT GCACGACTAT CAGAAACACC GCGTCTGCAC GCTGCTCGAT CCGACGTCCG ACCCGCTCGG CAAAGGCTTC CACACGATCC AGGCGGTGAT CGCGATCGGC TCGGGCGGCC CGCTCGGCAA GGGGTATCTG AAGGGCACGC AGGCGCACCT CGAATTCATT CCGGAAAAGC ACACCGATTT CATCTTCGCG GTGTTTTCCG AGGAATTCGG GCTCGTCGGC GGGCTCGTGC TGCTGACGCT GTACATGGCG CTGATCGCGC GCGGGCTCTA CATCGCCGCG CAGGGCGCGA CGCTGTTCGG GCGGCTGCTC GCCGGCTCGC TCACGCTCGC GTTCTTCGTC TACGCGTTCG TCAATATCGG AATGGTGAGC GGCGTGCTGC CCGTCGTCGG CGTGCCGCTG CCGTTCATGA GCTACGGCGG CACGGCGCTC ACGACGCTCG GCATCGCCGT CGGGCTCATC ATGAGCGTCG GGCGGCAGAA GCGGCTGATG AAGAGTTGA
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Protein sequence | MQFDKRASLD KIKQMFAGFD RPLALIVFLL LCVGIVTLYS ASVDVPGRVE DQLRNIMLTF VLMWVIANIP PQTLMRFAVP LYSFGVALLV AVALFGMTKK GAKRWLNVGV VIQPSEILKI ATPLMLAWYY QRRESSLRWY DFVVAFAILM VPVGLIAKQP DLGTAVLVFA AGLFVIYLAG LSFKLIVPVL VAGVLAVGSI AVFEERICQP EVVWPLMHDY QKHRVCTLLD PTSDPLGKGF HTIQAVIAIG SGGPLGKGYL KGTQAHLEFI PEKHTDFIFA VFSEEFGLVG GLVLLTLYMA LIARGLYIAA QGATLFGRLL AGSLTLAFFV YAFVNIGMVS GVLPVVGVPL PFMSYGGTAL TTLGIAVGLI MSVGRQKRLM KS
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