| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0155 |
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| Symbol | topB |
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| ID | 4899330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 146666 |
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| End bp | 149386 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640133385 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_001064439 |
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| Protein GI | 126453699 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACCC GCTTTTTTGC TCACGCCGGC CGCCATTTGG GCGTCGTGTG CTATAAAGCC
GTCGTAAAAG GGCCCGCATC GGGCTCGCCC GGTCTATCAA TACACACTGT CATGTCGAAA
GCACTCATCA TTGCGGAAAA GCCTTCGGTC GCGAACGACA TCGCGCGTGC TTTGGGCGGC
TTTACCAAGC ATGACGAATA CTACGAGAGC GACGAATACG TGCTGTCGTC GGCGGTCGGC
CACCTGCTCG AAATCGCCGC GCCCGAGGAA TACGAAGTCA AGCGCGGCAA ATGGAGCTTC
GCGCATCTGC CCGTCATCCC TCCCCATTTC GATCTGAATC CGATCGCGAA AAGCGAGTCG
CGCCTGAAGG TGCTGACGAA GCTGATCAAG CGCAAGGATG TCGACCGTCT GATCAACGCA
TGCGACGCGG GGCGCGAGGG CGAGCTGATC TTCCGCCTGA TCGCGCAGCA CGCGAAGGCC
AAGCAGCCGG TCCAGCGCCT GTGGCTGCAG TCGATGACGC CCGCCGCGAT CCGCGACGGC
TTCGCGCACC TGCGCACCGA CATGGACATG CAGCCGCTCG CCGATGCCGC GCGTTGCCGC
TCGGAGGCCG ACTGGCTCGT CGGCATCAAC GGCACGCGCG CGATGACGGC GTTCAACAGC
AAGGGCGGCG GCTTCTTCCT GACGACCGTC GGCCGCGTGC AGACGCCCAC GCTGTCGATC
GTCGTCGAGC GCGAGGAGAA GATTCGCCGC TTCGTGCCGC GCGACTACTG GGAAGTGCGC
GCGGAATTCG TCTGCGCCGG CGGTTTCTAC GAAGGCCGCT GGTTCGATCC GAAGTTCAAG
AAGGACGAAT TCGACCCTGA AAAACGCGAT TCGCGCCTCT GGAGCCTGCC TGCCGCAGAG
ACGATCGTCG CCGCGTGCCG CGACCACCTC GGCACGGTCA CCGAGGAATC GAAGCCGTCG
ACGCAGCTTT CGCCGCTGCT GTACGACCTG ACGAGCCTGC AGCGCGAGGC GAACAGCCGC
TTCGGCTTCT CCGCGAAGAA CACGCTCGGC CTGGCGCAGG CGCTGTACGA GAAGCACAAG
GTGCTCACCT ATCCGCGTAC CGACGCGCGC GCGCTGCCGG AGGACTACCT CGGCACGGTG
AAGTCGACGC TCGAGATGCT CAAGGAGAGC AACAACTACC TGCCGCACGC GAAGCAGGTG
CTCGACAAGA ACTGGGTGAA GCCGAACAAG CGCATCTTCG ACAACTCGAA GATCAGCGAT
CACTTCGCGA TCATCCCGAC GCTGCAGGCG CCGAAATCGC TGTCCGAGCC GGAACAGAAG
CTCTACGACC TCGTCGTCAA GCGCTTCCTC GCGGTGTTCT TCCCGGCCGC CGAATTCAAG
GTGACCACGC GGATCACCGA GGTTGCCGGC CATCACTTCA AGACGGAAGG CAAGGTGCTC
GTCGAGCCCG GCTGGCTGCA GGTCTACGGC CGTGACGCCG AGGGCGCCGA CGCGAATCTC
GTGCCGGTGC AGAAGGGCGA GAAGGTCAAG ACCGACAAGA TCGCCGCGCA CGGCCTCACG
ACGAAGCCGC CCGCACGCTA TTCGGAAGCG ACGCTGCTGT CGGCGATGGA AGGCGCGGGC
AAGCTCGTCG AAGACGACGA ACTGCGCGAG GCGATGGCCG CGAAGGGCCT CGGCACGCCG
GCCACGCGCG CGGCGATCAT CGAAGGCCTG CTCGGCGAGA AGTACCTCGT GCGCGAAGGC
CGCGAGCTGA TTCCGACCGC GAAGGCGTTC CAGCTGATGA CCCTGTTGCG CGGCCTCGGC
GTGAAGGAGC TGACCGCGCC CGAGCTGACG GGCGAATGGG AATACAAGCT GTCGCAGATG
GAGCGCGGCA ACCTGCAGCG CGACGCGTTC ATGCAGGAAA TCGCGCGGAT GACGCAGACG
ATCGTCAAGC GCGCGAAGGA ATACGACTCC GACACGATCC CGGGCGACTA CGCGACGCTC
GAAACGCCGT GCCCGAACTG CGGCGGCCAG GTCAAGGAGA ACTATCGGCG CTTCGCGTGC
ACGAAATGCG AATTCTCGAT CTCGAAGATT CCGGGCAGCC GGCAGTTCGA GATCGCCGAA
GTCGAGGAAC TGCTGCGGAA GAAGGAGATC GGGCCGCTGT CGGGCTTCCG CAGCAAGATG
GGCCGACCGT TCTCGGCGAT CCTCAAGCTC ACGTTCGACG ACGAGACGAA GAATTACAAG
CTCGAATTCG ACTTCGGCCA GGAGCAAGGC GGCGAGGAAG GCGAAGCGCC CGATTTCTCC
GCGCAGGAGC CGGTCGGCGC GTGCCCGAAG TGCAAAGGCC GCGTGTTCGA GCACGGCATG
AGCTATGTCT GCGAGCACGC GGTCGCGAAC CCAAAGACCT GCGACTTCCG CTCCGGCAAG
GTGATCCTGC AGCAGGAGAT CACCCGCGAG CAGATGGCGA AACTCCTCGA GAACGGCCGC
ACCGATCTGC TGCCGAACTT CAAGTCGTCG CGCACCGGGC GCAACTTCAA GGCGTATCTC
GTCAAGCAGC CGGACGGCAA GATCGGCTTC GAGTTCGAGA AGAAGGAGCC GAAGCCCGCA
GCCGCGAAGA AGACCGCGGC CAGATCGTCG GCCGCGGCCG ACGATGCGGC AGCCGACAGC
GGGGAGAAAG CCGAGAAGAA GGCGGCACCT GCGCGCAAGA CGGCCGCGCG CAAGACGCCG
GCCCGCAAGA CGGGCTCGTG A
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| Protein sequence | MMTRFFAHAG RHLGVVCYKA VVKGPASGSP GLSIHTVMSK ALIIAEKPSV ANDIARALGG
FTKHDEYYES DEYVLSSAVG HLLEIAAPEE YEVKRGKWSF AHLPVIPPHF DLNPIAKSES
RLKVLTKLIK RKDVDRLINA CDAGREGELI FRLIAQHAKA KQPVQRLWLQ SMTPAAIRDG
FAHLRTDMDM QPLADAARCR SEADWLVGIN GTRAMTAFNS KGGGFFLTTV GRVQTPTLSI
VVEREEKIRR FVPRDYWEVR AEFVCAGGFY EGRWFDPKFK KDEFDPEKRD SRLWSLPAAE
TIVAACRDHL GTVTEESKPS TQLSPLLYDL TSLQREANSR FGFSAKNTLG LAQALYEKHK
VLTYPRTDAR ALPEDYLGTV KSTLEMLKES NNYLPHAKQV LDKNWVKPNK RIFDNSKISD
HFAIIPTLQA PKSLSEPEQK LYDLVVKRFL AVFFPAAEFK VTTRITEVAG HHFKTEGKVL
VEPGWLQVYG RDAEGADANL VPVQKGEKVK TDKIAAHGLT TKPPARYSEA TLLSAMEGAG
KLVEDDELRE AMAAKGLGTP ATRAAIIEGL LGEKYLVREG RELIPTAKAF QLMTLLRGLG
VKELTAPELT GEWEYKLSQM ERGNLQRDAF MQEIARMTQT IVKRAKEYDS DTIPGDYATL
ETPCPNCGGQ VKENYRRFAC TKCEFSISKI PGSRQFEIAE VEELLRKKEI GPLSGFRSKM
GRPFSAILKL TFDDETKNYK LEFDFGQEQG GEEGEAPDFS AQEPVGACPK CKGRVFEHGM
SYVCEHAVAN PKTCDFRSGK VILQQEITRE QMAKLLENGR TDLLPNFKSS RTGRNFKAYL
VKQPDGKIGF EFEKKEPKPA AAKKTAARSS AAADDAAADS GEKAEKKAAP ARKTAARKTP
ARKTGS
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