| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0133 |
|---|
| Symbol | alkA |
|---|
| ID | 4899976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 127526 |
|---|
| End bp | 128440 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640133363 |
|---|
| Product | DNA-3-methyladenine glycosylase 2 |
|---|
| Protein accession | YP_001064418 |
|---|
| Protein GI | 126452165 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.221432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCCCG ACAGCGTCGT GCTCGAGCTG CCGTTCAAAT CGCCGTACGA TTGGCCGCGC
GTGCTGCGCT TCTTCGCGGG GCGCGCGATT CCGGGCGTCG AGGCGGTCGG GGACGGCGCG
TATCGGCGCA CGGTCGACCA TCACGGCGCG ATCGGCACGT TGACGGTGCG CAAGCATCCG
CGCAAGCGCT GTCTTGTCGC GCTCGTCGAG GGCGATGCGG CGCGGCATGC GGACGCTGCA
TTCGCCGCGC GGCTTTCGAC GATGTTCGAT TTGCAGGCCG ATCCGGCCGC GATCGGCGCG
CATCTCGCGC GCGACGCGTG GTTCGCGCCG CTCGTCGGCG CCGCGCCCGG CCTGCGCGTG
CCGGGCGCGT GGTCGGGCTT CGAGCTGATC GTGCGCGCGA TCGTCGGCCA GCAGGTGAGC
GTGAAGGCCG CGACGACGAT CGTCGGGCGG CTCGTCGAGC GCGCGGGCGA GCGGCTTGCC
CCGCACGCGC CGGGCGCGAT TGGCTGGCGG TTTCCGGAGC CCGCCGCGCT CGCCGCGTGC
GACGTGTCGC GCATCGGGAT GCCGGGCAAG CGTGCCGCGG CGCTGCAGGG CGTCGCGCGC
GCGGTCGCCT CGGGCGACGT GCCGCTCGAT GCGTACGCGA GCGATCCGGC CGGCGTGCGC
GCCGCGCTGC TCGCGCTGCC GGGGATCGGC CCGTGGACCG TCGAATACGT CGCGATGCGC
GCATGGCGCG ACGCCGACGC ATGGCCCGCG ACCGACCTCG TGCTGATGCA GGCGATCGTC
GCGCGCGACC CGGCGCTAGA CCGGCCGGCA AGCCAGCGCC TGCGCGCCGA TGCGTGGCGG
CCGTGGCGCG CGTATGCGGC GATGCATCTA TGGAACGAGA TCGCCGATCG CGCCGGTTCG
GCGCGCGGCG GATAG
|
|---|
| Protein sequence | MRPDSVVLEL PFKSPYDWPR VLRFFAGRAI PGVEAVGDGA YRRTVDHHGA IGTLTVRKHP
RKRCLVALVE GDAARHADAA FAARLSTMFD LQADPAAIGA HLARDAWFAP LVGAAPGLRV
PGAWSGFELI VRAIVGQQVS VKAATTIVGR LVERAGERLA PHAPGAIGWR FPEPAALAAC
DVSRIGMPGK RAAALQGVAR AVASGDVPLD AYASDPAGVR AALLALPGIG PWTVEYVAMR
AWRDADAWPA TDLVLMQAIV ARDPALDRPA SQRLRADAWR PWRAYAAMHL WNEIADRAGS
ARGG
|
|---|
| |