Gene BURPS1106A_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_0107 
SymboloxaA 
ID4901728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp104217 
End bp105893 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content64% 
IMG OID640133337 
Productputative inner membrane protein translocase component YidC 
Protein accessionYP_001064392 
Protein GI126453447 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0706] Preprotein translocase subunit YidC 
TIGRFAM ID[TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATCA AACGCACCGT CCTATGGGTG ATCTTCTTCA TGTCAGCGGT CATGCTGTTC 
GACAACTGGC AACGGTCCCA CGGACGCCCG TCGATGTTCT TCCCGAACGT CACGCAGACG
AACACCGCGT CGAACGCGAC TAACGGCAAT GGCGCGTCGG GCGCGAGCGC GGCGGCGGCG
GCGAATGCGC TGCCGGCGGC CGCGACGGGC GCGGCCCCCG CGACGACCGC GCCTGCGGCG
CAGGCGCAGC TCGTGCGCTT CTCGACCGAC GTCTACAATG GCGAGATCGA CACGCGCGGC
GGCACGCTCG CGAAACTGAC GCTGACGAAG GCGGGCGACG GCAAGCAGCC CGACCTGTCG
GTGACGCTGT TCGATCACAC GGCGAACCAC ACGTATCTCG CGCGCACGGG CCTGCTCGGC
GGCGATTTCC CGAATCACAA CGACGTCTAT GCGCAAGTGG CCGGCCCGAC GTCGCTCGCG
GCCGACCAGA ACACGCTGAA GCTGTCGTTC GAATCGCCGG TGAAGGGCGG CGTGAAGGTG
GTGAAGACGT ACACGTTCAC GCGCGGCAGC TACGTGATCG GCGTCGACAC GAAGATCGAG
AACGTCGGCG CCGCGCCCGT GACGCCGAGC GTATACATGG AGCTCGTGCG CGACAACTCG
TCGGTCGAGA CGCCGATGTT CTCGCATACG TTCCTCGGGC CGGCGGTGTA CACGGATCAG
AAGCACTTCC AGAAGATCAC GTTCGGCGAC ATCGACAAGA ACAAGGCCGA TTACGTCACG
TCCGCCGACA ACGGCTGGAT CGCGATGGTT CAGCACTACT TCGCGTCCGC CTGGATTCCA
CAATCGGGCG CGAAGCGCGA CATCTACGTC GAGAAGATCG ACCCGACGCT GTACCGCGTC
GGCGTGAAGC AGCCGGTCGC GGCGATCGCG CCGGGCCAGT CGGCCGACGT GTCCGCGCGC
CTGTTCGCCG GCCCGGAGGA AGAGCGGATG CTCGAAGGCA TCGCGCCGGG CCTGGAGCTC
GTGAAGGATT ACGGCTGGGT GACGATCATC GCGAAGCCGT TGTTCTGGCT GCTCGAGAAG
ATTCACGGCT TCGTCGGCAA TTGGGGCTGG GCGATCGTGC TGCTCACGCT GCTGATCAAG
GCGGTGTTCT TCCCGCTGTC GGCGGCGAGC TACAAGTCGA TGGCGCGGAT GAAGGAAATC
ACGCCGCGGA TGCAGGCGCT GCGCGAACGC TTCAAGAGCG ATCCGCAGAA GATGAACGCG
GCGCTGATGG AACTGTACAA GACGGAGAAG GTGAACCCGT TCGGCGGCTG CCTGCCGGTG
GTGATCCAGA TTCCGGTGTT CATCTCGTTG TACTGGGTGC TGCTCGCGTC GGTCGAAATG
CGCGGCGCGC CGTGGGTTCT GTGGATTCAC GACCTGTCGC AGCGCGACCC ATACTTCATC
CTGCCGGTGC TGATGGCCGT CTCGATGTTC GTGCAGACGA AGCTGAACCC GACTCCCCCG
GACCCGGTTC AGGCGAAGAT GATGATGTTC ATGCCGATCG CGTTCTCGGT GATGTTCTTC
TTCTTCCCGG CCGGCCTCGT GCTGTACTAC GTGGTGAACA ACGTGCTGTC GATCGCGCAG
CAGTACTACA TCACGCGCAC GCTCGGCGGC GCCGCGGCGA AGAAAAAGGC GAGCTGA
 
Protein sequence
MDIKRTVLWV IFFMSAVMLF DNWQRSHGRP SMFFPNVTQT NTASNATNGN GASGASAAAA 
ANALPAAATG AAPATTAPAA QAQLVRFSTD VYNGEIDTRG GTLAKLTLTK AGDGKQPDLS
VTLFDHTANH TYLARTGLLG GDFPNHNDVY AQVAGPTSLA ADQNTLKLSF ESPVKGGVKV
VKTYTFTRGS YVIGVDTKIE NVGAAPVTPS VYMELVRDNS SVETPMFSHT FLGPAVYTDQ
KHFQKITFGD IDKNKADYVT SADNGWIAMV QHYFASAWIP QSGAKRDIYV EKIDPTLYRV
GVKQPVAAIA PGQSADVSAR LFAGPEEERM LEGIAPGLEL VKDYGWVTII AKPLFWLLEK
IHGFVGNWGW AIVLLTLLIK AVFFPLSAAS YKSMARMKEI TPRMQALRER FKSDPQKMNA
ALMELYKTEK VNPFGGCLPV VIQIPVFISL YWVLLASVEM RGAPWVLWIH DLSQRDPYFI
LPVLMAVSMF VQTKLNPTPP DPVQAKMMMF MPIAFSVMFF FFPAGLVLYY VVNNVLSIAQ
QYYITRTLGG AAAKKKAS