Gene BURPS1106A_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_0097 
Symbol 
ID4899426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp88777 
End bp91245 
Gene Length2469 bp 
Protein Length822 aa 
Translation table11 
GC content58% 
IMG OID640133327 
Producttype I restriction-modification system M subunit 
Protein accessionYP_001064382 
Protein GI126453526 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID[TIGR00497] type I restriction system adenine methylase (hsdM) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.836051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCTCA CGCTTTCCCA GCTTGAGCGC CACCTCTTCA AGGCCGCTGA CATCCTGCGC 
GGCAAGATGG ACGCCTCGGA ATTCAAGGAA TACATCTTCG GCATGCTGTT CTTGAAGCGC
TGTTCGGACG TTTTCGACCA GCGGCGGGAA CAGGTCATCC GCAATGAACT CGCGGCCGGC
AAGTCCGAGT TCGAGGCCCA GACAAGTGCC GACCTGAAAC GATGGTACGG CGAGTCGTTT
TACGTCCCGC CTCGTTCGCG GTGGGAATAC CTGATGAATG AGGCTCACAA CGACGTCGGC
GGATTTTTGA ACCGCGCGCT CGGAGGTCTC GAGAACAACA ACAGCAGCCT GAGCGAAGTG
CTCGAGCACA TCGACTTTTC GCGGAAGGTC GGGCAGGCGA AGATCCCCGA CATCAAGCTC
CGTCAGCTGA TTACTCATTT CAGCCTGTAT CGCCTGCGCA ACGAGGACTT CGAGTTCCCC
GACCTGCTCG GCGCGGCGTA TGAGTATCTG ATTAGGGAAT TTGCGGATTC AGCTGGCAAA
AAAGGCGGTG AGTTCTATAC CCCGCGGTCA GTTGTTCGCA TGATGGTCCG CCTGCTGAAG
CCGCAGCAGA ACCATAGCAT TTACGACCCC TGCGTCGGCT CGGGCGGTAT GTTGATTCTC
TCGAAGGAAT ACATCGATGA GCACGGGCAA GACGGCAGCC GCGCTGAGCT GTACGGGCAA
GAAGCCAACG GCACGGTGTG GTCGATCGCC AAAATGAACA TGCTCCTGCA CGGTATTGCC
ACCGCCGACC TGCGGAATGA CGACACGTTG TCCGAGCCGC AGCACGTCGA AGGCGGGGAA
CTGATGCGTT TCGATCGGGT TCTGAGCAAT CCACCGTTTT CGATTAACTG GGGAACCACC
GACACTGACC GGACCGGGCA AACTGTATGG TCGCCCAAAT TCCGCGCCGA ACGATTCAAG
TATGGCGAAG TAGCGCTCGG CAGCAAGAAG GCCGACCTGA TGTTCCTGCA GCACATGGTC
GCGGTACTGC GAGATGGCGG ACAACTCGCC ACGGTGATGC CGCATGGCGT CCTGTTCCGC
GGCGGTGAAG AGGGTGCAAT CCGAAAGGCA ATGATAGAGG CCGATCTGGT CGAAGCCGTG
ATCGGTCTGC CGGCCAATCT TTTTTACGGG ACAGGCATCC CCGCGTGCAT CCTGGTGCTG
CGCCAGCGGC TCGGAAACGC GACGGGCAAG CCAGTCGGCC GGCAAGGCAA GGTGCTGTTC
ATCAATGCGG ACCGCGAGTA TTTCGAAGGC CGGGCGCAGA ACTATCTCCT GCCGGAGCAC
ATCGAAAAAA TTGTCAGCAC GTTTGACGCG TTTGCGGAAG TACCGTGCTT CTCGGCGATC
GTCAGCATCG CGACGCTGCG TGAAAATGAC TACAACCTGA ATATTCGCCT GTACGCCGAT
AACGCGCCGC CGCCCGAGCC CCAAAACGTC CGGGCGCATC TGGTCGGCGG CATACCGAAG
TCCGAGGTGA AATCGAAGGC GTCACTCTTT ACTGCACACG GGCTCGACGT TGGCGCATTG
CTGGTCAGTC GCGGGAACAC GGGGAAGGAC GCCGAGTACA TGGAGTTTCG CCCCGAGGTG
GCCGATTATC AGTCGATAAA GACGCTGATC GAACGGCACG CCGGCGTCGT GGCCCGAGAA
AGCTCACTGT GGGAAACCTT CAACGCATGG TGGAATGACC ATAGCCCCCG CATCCGGGCA
TTGGCGACCG GGCATGGGTT TGTCGCCGTC CGCTCAGATC TCCTTGAGAG CTTCAGCGCA
GCGCTGGAAC CACTGGGTAT GTTGGATCGC TTCGAGGTGC AGGGCATCAT TGCGGGCTTC
TGGGATAGCG CGAAATATGA GTTTCAGACG CTGATGGCTC GCGGCGCGAA GGGCGTTGTC
GACGCGTGGC GCACCAGCGT TCTGACGGCG CTCGATGACG AAAAATCAAA GGATAACCCT
CACGAACACA AGCTCGTGAA GTTCCTGATG GCCGATTTTA TCGAAGAGCT TGCTGAGATG
GATGCCAAGA AGGCTGAACT GGACGCGCGG ATCAAGTCAG CGACGGAAGC AAATCCCGAT
TCCGACGAAG AGGAAGCCGG TAACGATTCT GAGCCGGCTG TTGATGATGA ACAGATCAAT
GAGTGGAAGC GTGAGCTGGC GAACGTAAAG AAGCAACTCA AAGCCAAAGA GCAGGGTTTC
GTGCGGCGGC TAAACTCGGC CGTCGACGCG CTCGATGAGG CAAAGTGTGC GTCGCTGCTG
CTAACGATCT TGCGTAATGA CATGCACACC ATCATTGAGC GGTATGTAGG CGTCCACCGC
AAGCAGGTCG TTGCCGCATT CGAGAGCTGG TGGGACAAGT ACCGGGTAAC CCTGGTCGAG
ATCGAAGACA AGCGTGATGC AGCGGCGAAG GCCGTGCAAG AGTTCTTGAG GGGGTTGGGG
TATGTGTGA
 
Protein sequence
MPLTLSQLER HLFKAADILR GKMDASEFKE YIFGMLFLKR CSDVFDQRRE QVIRNELAAG 
KSEFEAQTSA DLKRWYGESF YVPPRSRWEY LMNEAHNDVG GFLNRALGGL ENNNSSLSEV
LEHIDFSRKV GQAKIPDIKL RQLITHFSLY RLRNEDFEFP DLLGAAYEYL IREFADSAGK
KGGEFYTPRS VVRMMVRLLK PQQNHSIYDP CVGSGGMLIL SKEYIDEHGQ DGSRAELYGQ
EANGTVWSIA KMNMLLHGIA TADLRNDDTL SEPQHVEGGE LMRFDRVLSN PPFSINWGTT
DTDRTGQTVW SPKFRAERFK YGEVALGSKK ADLMFLQHMV AVLRDGGQLA TVMPHGVLFR
GGEEGAIRKA MIEADLVEAV IGLPANLFYG TGIPACILVL RQRLGNATGK PVGRQGKVLF
INADREYFEG RAQNYLLPEH IEKIVSTFDA FAEVPCFSAI VSIATLREND YNLNIRLYAD
NAPPPEPQNV RAHLVGGIPK SEVKSKASLF TAHGLDVGAL LVSRGNTGKD AEYMEFRPEV
ADYQSIKTLI ERHAGVVARE SSLWETFNAW WNDHSPRIRA LATGHGFVAV RSDLLESFSA
ALEPLGMLDR FEVQGIIAGF WDSAKYEFQT LMARGAKGVV DAWRTSVLTA LDDEKSKDNP
HEHKLVKFLM ADFIEELAEM DAKKAELDAR IKSATEANPD SDEEEAGNDS EPAVDDEQIN
EWKRELANVK KQLKAKEQGF VRRLNSAVDA LDEAKCASLL LTILRNDMHT IIERYVGVHR
KQVVAAFESW WDKYRVTLVE IEDKRDAAAK AVQEFLRGLG YV