Gene BURPS1106A_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_0073 
Symbol 
ID4901291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp70390 
End bp72513 
Gene Length2124 bp 
Protein Length707 aa 
Translation table11 
GC content71% 
IMG OID640133303 
Productputative 3-hydroxyacyl-CoA dehydrogenase 
Protein accessionYP_001064358 
Protein GI126454240 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGATT ACACGCTCGA TGACGACGGC ATCGCGACCT TGAGCTGGAA CCTGCCGGCG 
CGCAGCCAGA ACGTGCTGAA CGGCGAGAGC TGCGAGGCGT TCTTCGCGGC GGCGGCGCGC
GCGTTGCAGG ATGCGGCGGT GAAGGGAATG CTCGTCACGT CGGCGAAGCC CGACTTCATC
GCGGGCGGCG ACCTCGAATG GCTGCAGGCG AGCGACAGCG CCGAGACGCT CTTCGCGCGC
ACGTGCGAGC TGCATCGCGC GCTGCGCGCG CTCGAAACAG GCGGCAAGCC GGTGGCGATC
GCGATGCCGG GCTCGGCGCT CGGCGGTGGG CTGGAGATCG CGCTCGCGGG CCACTATCGT
GTCGCGGCCG ACAATCCGAA GGCGCGCTTC GGCCTGCCCG AAGTGACGCT CGGCCTGCTG
CCGGGCGGCG GCGGCACGCA GCGCCTGCCG CGTCTCGTCG GCGTCCAGGC GTCGCTGCCG
CTGTTGCTCG AAGGCAAGCG GCTGAAGGCG GCCGACGCGC TGGCCGCGGG CATCCTGCAT
GCGGTCGTGC CGGCGGGCGA GGAGATCGCG GCCGCGCGCG CGTGGCTGCT CGACGCGAGC
CGCCGCACCG CGACGCAGCC GTGGGACGCG AAGGGCTTCC GGATTCCGGG CGGCGCGCTC
ACGCATCCGT CCGTCCAGCA GGTGTTCATG GCGGCGAACG CGCTCGCGCG GCAGAAGACG
TATGGCAACT ACCCGGCCGT CGCGAGCATC CTGTCGTGCG TGTACGAAGG GCTGCTGACC
GATCTCGACA CGGGCTTGAA GACCGAGGCG CGCTATTTCG TGAAGGCGGT GCTGTCGCCG
GAAGCGAAGG CGATGATCCG CACGCTGTTC TTCGGGATGA ACGAAGCGAA CAAGCTCGCC
GCGCGGCCGG CCGGCGTGCC GACGCAGCGC TACCGGAAGG TCGGCGTGCT CGGCGCGGGG
ATGATGGGCG CGGGCATCGC GTACGTGAGC GCGAAGGCGG GGCTCGACGT CGTGCTGATC
GATACCGGCG AAGAGGCGGC CGCGCGCGGC AAGGACTATT CGCGCAAGCT CGTCGACAAG
CAGGTGCAGC GCGGCCGGCT CGCGCGGGAA AAGGCCGATG CATTGCTCGC GAAGATCGTG
CCGACGACCG ATTTCGCGCG GCTCGACGGC GCGCAGCTCG TGATCGAGGC GGTGTTCGAG
GATCGCGCGA TCAAGGCCGA CGTCACGCGC CGGAGCGAAG CGGTGCTCGC GCCCGACGCG
CTTTTCGCGT CGAACACGTC GACGCTGCCG ATCACGGGGC TCGCGCAGGC GAGCGCGCGG
CCGGCGAACT TCATCGGCCT GCATTTCTTC TCGCCGGTGG ACAAGATGCC GCTCGTCGAG
GTGATCGTCG GCCGCGACAC GAGCGAGGCG ACGCTCGCGC GCGCGCTCGA CTACGTGAAG
ACGATCGGCA TGACGCCGAT CGTGGTCAAC GATTCGCGGG GCTTCTACAC GAGCCGCGTG
TTTTCGACGT ACGTGCTCGA AGGGCTCGCG ATGCTCGCCG AGGGCGTCGC GCCCGCGCTG
ATCGAGAACG CCGGATTGCT CGCCGGCATG CCGGTGGGCC CGCTCGCGCT GACCGACGAG
GTGTCGAGCG AGCTGATCCA CAAGATCACC AGGCAGACGC GCGCCGATCT CGGCGACGCG
TACGTCGCGC GCCCCGGCGA GGACGTGGCC GCGCGCATGG TCGAACTCGG CCGGCTCGGC
CGCAAGGCGG GGCTCGGCTA TTACGACTAT CCGGCGAGCG GCGGCAAGAA GGCGCTGTGG
CCGGGGCTCG CGCAGGAGTT TCCGCTCGCG GCCGAGCAGC CCGACGTGGC GGCGCTGATC
GAGCGGCTCG TGACGGTGCA GGCGGTCGAG ACCGCGCGCT GCCTCGAAGA GCGCGTGCTG
ACGACGGCGC GCGATGCGGA CGTCGGCGCG ATTCTCGGCT GGGGTTTCCC GGCGTTCCGC
GGCGGGCCCG CGTCGTACAT TCACGGCGTC GGGGTGGACG CGTTCGTCGC GACGTGCGAT
CGTCTTGCCG CGCGGCACGG CGCGCGTTTC GCCGCGCCGG CGTTGCTGCG CGAGATGGCG
GCGCAGGGGC GAAGCTTCTA TTGA
 
Protein sequence
MIDYTLDDDG IATLSWNLPA RSQNVLNGES CEAFFAAAAR ALQDAAVKGM LVTSAKPDFI 
AGGDLEWLQA SDSAETLFAR TCELHRALRA LETGGKPVAI AMPGSALGGG LEIALAGHYR
VAADNPKARF GLPEVTLGLL PGGGGTQRLP RLVGVQASLP LLLEGKRLKA ADALAAGILH
AVVPAGEEIA AARAWLLDAS RRTATQPWDA KGFRIPGGAL THPSVQQVFM AANALARQKT
YGNYPAVASI LSCVYEGLLT DLDTGLKTEA RYFVKAVLSP EAKAMIRTLF FGMNEANKLA
ARPAGVPTQR YRKVGVLGAG MMGAGIAYVS AKAGLDVVLI DTGEEAAARG KDYSRKLVDK
QVQRGRLARE KADALLAKIV PTTDFARLDG AQLVIEAVFE DRAIKADVTR RSEAVLAPDA
LFASNTSTLP ITGLAQASAR PANFIGLHFF SPVDKMPLVE VIVGRDTSEA TLARALDYVK
TIGMTPIVVN DSRGFYTSRV FSTYVLEGLA MLAEGVAPAL IENAGLLAGM PVGPLALTDE
VSSELIHKIT RQTRADLGDA YVARPGEDVA ARMVELGRLG RKAGLGYYDY PASGGKKALW
PGLAQEFPLA AEQPDVAALI ERLVTVQAVE TARCLEERVL TTARDADVGA ILGWGFPAFR
GGPASYIHGV GVDAFVATCD RLAARHGARF AAPALLREMA AQGRSFY