Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0044 |
Symbol | |
ID | 4901095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 40500 |
End bp | 41660 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640133274 |
Product | putative porin |
Protein accession | YP_001064329 |
Protein GI | 126454428 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGTCA ACACGATATC GGAGGGGACG ATCTTGAAAC GACAATACCT GGCACTTTCC ATCGCGACGG CCGCCTGCGC GGCGCCGCAA GCGCACGCGC AGTCGAGCGT CCAGCTCTAC GGGCTCATCG ACCTGAGCGT TCCGACCTAT CGCTCGCACG CGAACGCGAA GGGCGATCAC GTGATCGGCA TGGGGCTCGG CGGCGAGCCG TGGTTCAGCG GCAGCCGCTG GGGGCTGAAG GGCGCGGAGG ACATCGGCGG CGGCACGAAG GTGATCTTCC GGCTCGAAAG CGAATACACG GTAGCCGACG GCAACATGGA GGACCCGGGC CAGATCTTCG ACCGCGATGC GTGGGTCGGC GTCGAAAACG ACACGTTCGG CAAGCTCACC GCGGGCTTCC AGAACACGAT CGCGCGCGAC GCGGCGGCGA TCTACGGCGA CCCTTACGGC TCGGCGAAGC TCACGACCGA GGAAGGCGGC TGGACGAACG CGAACAACTT CAAGCAGATG ATCTTCTACG CGGCCGGTGC GACGGGCACG CGCTACAACA ACGGCCTCGC GTGGAAGAAG CTGTTCGGCA ACGGCATCTT CGCGAGCGCG GGCTACGCGT TCAGCAATTC GACGAGCTTC GGGCAGAACT CGACCTATCA GGTCGCGCTC GGCTACAACG GCGGCCCGTT CAACGTGTCG GGCTTCTTCA GCCACGTGAA CCACGCGGGC TACGCGAACA AGTCGTTCTC GGTCGGCGGC AACTACACGT TCGACATCTT CCGCGTGAAC GCCGGCTACT TCCGCTACCT GGGCGATCAG GGCGCGCTCG GCCAGCGCCA GGACAACGCG TGGACGGTGT CGTTCAAGGT CGCGCCGAAG GGCGCGCTCG ACTACGAGCT CGGCTATCAG CAGATGCGCG TGCACAACGC CGCGTACAAC AGCGACGGCA ACGTGCCGAA CGCGAACATC GGCGACTTCA GCCTCACGTC GGGCGTCGGC AACGGCTTCA AGGAAACGCT GTACGGCTCG GTGTTCTACC ACCTGTCGAA GCGCACCGAG CTGTACCTCG CCGGCGACTA CATGCGCCTG CACGGCGGCT ATACGGTCGC GTCCACGCAC GGCGCGACCA ATCAGCTCGA GCTGACGACC GGCATCCGCA CGCGGTTCTG A
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Protein sequence | MAVNTISEGT ILKRQYLALS IATAACAAPQ AHAQSSVQLY GLIDLSVPTY RSHANAKGDH VIGMGLGGEP WFSGSRWGLK GAEDIGGGTK VIFRLESEYT VADGNMEDPG QIFDRDAWVG VENDTFGKLT AGFQNTIARD AAAIYGDPYG SAKLTTEEGG WTNANNFKQM IFYAAGATGT RYNNGLAWKK LFGNGIFASA GYAFSNSTSF GQNSTYQVAL GYNGGPFNVS GFFSHVNHAG YANKSFSVGG NYTFDIFRVN AGYFRYLGDQ GALGQRQDNA WTVSFKVAPK GALDYELGYQ QMRVHNAAYN SDGNVPNANI GDFSLTSGVG NGFKETLYGS VFYHLSKRTE LYLAGDYMRL HGGYTVASTH GATNQLELTT GIRTRF
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