Gene BURPS1106A_0018 details

Gene Information

• Locus tag: BURPS1106A_0018
• Symbol: gspM
• ID: 4900752
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 18892
• End bp: 19419
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640133248
• Product: general secretory pathway protein M
• Protein accession: YP_001064303
• Protein GI: 126454827
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3149] Type II secretory pathway, component PulM

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.563775
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACCATT CGGAGCCGAT CATGAAAACG ACGGAGTTCA ACGAAGCACT GAGCCAGTTC 
TGGGAGGCCC GCACCGCACG CGAAAAGTTG CTGCTCGGCT GGGGCGGCGC GGTGCTCGCG 
CTCGCGATCG CGTATTCGGT GTTATGGTCG CCCGCGCAGG AGGGCCGCGC GCGGATCCAG 
CGCGAGCTGC CGACGATGCG CCACGAGCTC GCCGAAATGA CCGCGCAGGC GAACGAGGCG 
CGCTCGCTCG CGGGCGCCGC GCAGGGCGTC GCGCCGACGG GCGTCGCGTT GAAGGATGCG 
CTCGCCGCGT CGCTGTCCGA TCACGGGCTC GCGGCGGCGG CGCCGCAGGT GGTCGGCGGC 
GGCGTGCAGA TCCAGTTGAA GAACGCGTCG TTCCCCGCGT GGACGCAGTG GCTCGACGAC 
GTGCGCCGCC AGTTCAAGGC GCAAGTCGTC GAAGCGCACG TGAGCGCGCT GAAGGAGGAC 
GGCCAGGTCG ATCTGACGGC GGTGCTGCAG CCGGCGTCGG TCAAGTGA 

 

Protein sequence

MDHSEPIMKT TEFNEALSQF WEARTAREKL LLGWGGAVLA LAIAYSVLWS PAQEGRARIQ 
RELPTMRHEL AEMTAQANEA RSLAGAAQGV APTGVALKDA LAASLSDHGL AAAAPQVVGG 
GVQIQLKNAS FPAWTQWLDD VRRQFKAQVV EAHVSALKED GQVDLTAVLQ PASVK