Gene BURPS1106A_0014 details

Gene Information

• Locus tag: BURPS1106A_0014
• Symbol: gspI
• ID: 4902296
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 15093
• End bp: 15503
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 640133244
• Product: general secretion pathway protein I
• Protein accession: YP_001064299
• Protein GI: 126455288
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01707] general secretion pathway protein I; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0635584
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGATGC GCGCGCCCGC CCCGCCCCGC TCTCCCGCGC GCTCGCGCGG CTTCACGATG 
ATCGAGGTGC TCGTCGCGCT CGCGATCATC GCGGTCGCGC TCGCGGCGTC GATCCGCGCG 
GTGGGCTCGA TGGCCACGGG CGCGTCCGAT CTGCACGCGC GCCTGCTCGC TGGCTGGAGC 
GCGGACAACG CGCTCGCGCA ACTGCGGCTC GCGCACGCGT GGCCCGACAT CGGCATGCAG 
ACGTTCGACT GCTCGCAGGG CAACGTCGCG CTCACCTGCA CGCAGCGCGT GAGCTCGACG 
CCGAATCCCG TGTTCAGGCG CGTCGAGATC GCGGTGTCGA TGAACGGACG GGCCGGCGTG 
CTCGCGCAGA TGGTGACGGT GGTCGCGAAT GAAACCAGCC GTCCGCTCTG A 

 

Protein sequence

MTMRAPAPPR SPARSRGFTM IEVLVALAII AVALAASIRA VGSMATGASD LHARLLAGWS 
ADNALAQLRL AHAWPDIGMQ TFDCSQGNVA LTCTQRVSST PNPVFRRVEI AVSMNGRAGV 
LAQMVTVVAN ETSRPL