Gene BURPS1106A_0012 details

Gene Information

• Locus tag: BURPS1106A_0012
• Symbol: gspG
• ID: 4900060
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 14010
• End bp: 14462
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 640133242
• Product: general secretion pathway protein G
• Protein accession: YP_001064297
• Protein GI: 126452305
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.127302
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAACGT GGATCACTCG CCGCTCTCAG GCAGCACGCC GTCAACGCGG CTTCACGCTG 
ATCGAGATCA TGGTCGTGGT GGCGATTCTC GGCATTCTCG CGGCGCTCAT CGTGCCGAAG 
ATCATGAGCC GTCCCGATGA AGCGCGCCGG ATCGCGGCGA AGCAGGACAT CGGCACGATC 
ATGCAGGCGC TCAAGCTGTA CCGCCTCGAC AACGGCCGCT ATCCGACCCA GGACCAGGGC 
CTGAACGCGT TGATCCAGAA GCCGACCACC GATCCGATCC CGAACAACTG GAAGGACGGC 
GGCTATCTCG AGCGCCTGCC GAACGATCCG TGGGGCAATT CGTACAAGTA TCTGAACCCG 
GGCGTGCACG GCGAGATCGA CGTGTTCAGC TACGGCGCCG ACGGCAAGGA AGGCGGCGAA 
AGCAACGATT CCGACATCGG CTCGTGGCAA TGA 

 

Protein sequence

MQTWITRRSQ AARRQRGFTL IEIMVVVAIL GILAALIVPK IMSRPDEARR IAAKQDIGTI 
MQALKLYRLD NGRYPTQDQG LNALIQKPTT DPIPNNWKDG GYLERLPNDP WGNSYKYLNP 
GVHGEIDVFS YGADGKEGGE SNDSDIGSWQ