| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A3285 |
|---|
| Symbol | |
|---|
| ID | 4887322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 3119301 |
|---|
| End bp | 3119906 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640133221 |
|---|
| Product | RNA polymerase sigma factor |
|---|
| Protein accession | YP_001064276 |
|---|
| Protein GI | 126442627 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000000025139 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCACG CGCGCGCCGC GCACGACGAT CCCGCCTATC TCGCGCAATT GCGCCACGAT
TTACTTCGCT TCGCGCGTCT GCAACTGCGC GACGCCGATG CGGCCGAAGA CGCCGTCCAG
GAGGCGCTCG CGGCGGCATG GGCGCAGGCC GAGCGCTTCG ACGGGCAGTC GAGCCACAAG
ACCTGGGTGT TCGGCATCCT GCGCAACAAG CTGATCGATA CGATCCGGGC GCGGCGCAGG
ACGATCAACG CGTCGGCGCT CGACGCGGAG CTCGACGGCG AAGCGCTTCT CGAGCGCGAA
CTGTTCGCGG ACAATGGGCA CTGGGCGCCG CACGCGAAGC CTCGTCCGTG GCCGAAGCCG
GAAACGATCC TGCAGCAGCG GCAGTTCTGG ATACTGTTCG AGACGTGTCT CGACCACCTG
CCGGAGCAGA TTGGCCGCGT ATTCATGATG CGCGAGTTTC TCGATTTCGC AATCGACGAC
ATTTGCACGG AGCTCGAACT GAAGGCGAAC CATTGCAGCG TGCTGCTGTA CCGCGCACGG
ACCCGACTGC GCACCTGTCT CACCGAAAAA GGCTTGACGA CCGAAGATGC TACTGGGGAA
ATGTAA
|
|---|
| Protein sequence | MQHARAAHDD PAYLAQLRHD LLRFARLQLR DADAAEDAVQ EALAAAWAQA ERFDGQSSHK
TWVFGILRNK LIDTIRARRR TINASALDAE LDGEALLERE LFADNGHWAP HAKPRPWPKP
ETILQQRQFW ILFETCLDHL PEQIGRVFMM REFLDFAIDD ICTELELKAN HCSVLLYRAR
TRLRTCLTEK GLTTEDATGE M
|
|---|
| |