| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A3277 |
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| Symbol | |
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| ID | 4888833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | - |
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| Start bp | 3111048 |
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| End bp | 3111896 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640133213 |
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| Product | squalene/phytoene synthase family protein |
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| Protein accession | YP_001064268 |
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| Protein GI | 126445402 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.173331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCGTTT CCAATCCCGT GGTGGACGAT AACGAAACCG ACGCCGCTGC CGTCACATCG
GGCAGCTCTT TCTATCTCGC GATGCGCATC CTGCCCGCGG AGCAGCGCGA TGCGATGTTC
CAGGTCTATG CGTTTTGCCG TGCGGTCGAC GACATCGCCG ACGAAGGCGG CGCGCGCGCG
GAGCGCGCGG CGCAGCTCGA CCGCTGGCGC GCCGACATCG ACGATTGCTA CGCGGGCAAG
CCGCGCGCGT CGCTCGTGCC GCTCGCGCGC GAGATCGGCA AGTTCGGCCT GCATCGCGAC
GACTTTCACG CGATGATCGA CGGCATGGCG ATGGACGCCG CCGAGGACAT CTGCGCGCCC
GACGAAGCCA CGCTCGATCT GTACTGCGAC CGCGTCGCGA GCTCGGCCGG CCGGCTATCG
GTGAGGATTT TCGGGATGCC GGACGAGCCC GGCCGCGTGC TGTCGCATCA TCTCGGCCGC
GCGCTGCAAC TGACGAATAT CCTGCGCGAC ATCGACGATG ACGCGGCGAT CAACCGTTGC
TACCTGCCGC GCGAACTGCT CGCGCGCGAG GGCATCGCGA TCGCCGATCC GCAGACGATC
GCGCGCGATC CGTTGCTGCC GCGCGTGTGC GCGACGCTCG TCGAGCGCGC ACTGCAACAT
TTCGCGCAGG CCGACGCGGT GATGGACGCG TCGCCGCGCG CGCAGGTTCG TGCGCCGCGC
ATCATGTCGG GCGCGTATCG CCTGATTCTC GAAGCCGCGG TCGCGCGCGG CTTCGCGCCG
CCGCGCGCGC CGCTGCGCAA GCCGCGCGCG CGAATGCTGC TGCTCGCGGC GCGTTACGCG
CTGTTTTGA
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| Protein sequence | MAVSNPVVDD NETDAAAVTS GSSFYLAMRI LPAEQRDAMF QVYAFCRAVD DIADEGGARA
ERAAQLDRWR ADIDDCYAGK PRASLVPLAR EIGKFGLHRD DFHAMIDGMA MDAAEDICAP
DEATLDLYCD RVASSAGRLS VRIFGMPDEP GRVLSHHLGR ALQLTNILRD IDDDAAINRC
YLPRELLARE GIAIADPQTI ARDPLLPRVC ATLVERALQH FAQADAVMDA SPRAQVRAPR
IMSGAYRLIL EAAVARGFAP PRAPLRKPRA RMLLLAARYA LF
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