Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A3257 |
Symbol | |
ID | 4887245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 3081548 |
End bp | 3082975 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640133193 |
Product | efflux ABC transporter, permease protein |
Protein accession | YP_001064248 |
Protein GI | 126442800 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.289143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATACGT TCATGTTGGC GCTGCGCAAC CTGCAGCGGA ACCGGCGGCG CTCGATCACG ACGCTGCTCG CGATGGTCGT CGGCGTGTGC GCGGTGCTGC TGTTCGGCGG CTTCAGCAAG GACATCACGT TCGGATTGCA GACCGATTTC GTGCGGCGCA GCGGCCATTT GCAGATTCAG CGTCACGGCT ATTACCAGTA CGGCAGCGGC AATCCGGTCG CCTACGGGAT CGGCGGCTAT GCGCGGCTGA TCGCGCAACT GCGCGACGAT CCGGTGCTCG CGCCGATGAT CGCGGTGATC ACCCCGACGC TGCAGTTCGG CGGGATCGCC GGCAACTTCG AGGCGGGCGT GTCGCGCACG GTGCTCGCGC AGGGCGCGAT CGCCGACGAG CAGGACCGGA TGCAGCAATG GAACGACTAC GGATTTCCGT TGACGCCGAA GCCGTATCCG CTCGTCGGCA CCGCGCCGGA TGCGGCGATC GTGGGCAACG GCGTCGCGCG TGTGCTGCAT CTGTGCGCGC CGCTGCGCGT GCCCGATTGC GGCGACGGCG ACGTCGCGAG GCAGCCCGCG CCGCAAGCGG CGTCGGGCGC GTCGGGCGCG GATGCGCCGG CCGACGTGCT CGCGCTCGCG GCGGCCGAGG CGCACGCGCA GGAAAGCGGG CGCGGCGAGC GCGCGGGCGC GGCGCACATC GAGGTGCTCG CGGCGAACGC GTACGGCGCG CCGAACGTCG GCGGCTTCAC GGTTGCGAAG GCCGAGCAGC AGGGCGTGAA GGAGCTCGAC GACGTTTATC TCGCGATGCA CTTGCCGCGC GCGCAGCGGC TCGTCTACGG CGGCGACGCG CCGCGCGTGA CGGCGATCGA GATCCAGCTC CGGCATACCG CGCAGCTTCC CGCCGCGCGT GCGCGGCTCG ACCGGCTGTT CGGCGGCCGC TTCGAGGGCC AGCCGCTCGA CGTGCTCGAT TTCGCCGCGC TGAACCCGTT CTACGACCAG ACGAACCGGA TGTTCTCGAT GATCTTCGGC TTCGTGTTCG TGCTGATCGG CGCGATCGTG CTGTTCGTCG TCAGCAACAC GATGAGCACG GCGATCCTCG AGCGAACCGT GGAGATCGGC ACGCTGCGCT CGATGGGCGT GCGCCGCGGC GGCATCCAGG CGCTGTTCGT CTGCGAGGGC GCGCTGCTCG GCGTCGTCGG CGCGTCGATC GGCGTGCTCG TCGCGCTCGC GCTCGCGTTC GTGGTCAATC ACAGCGGGCT CGCGTGGACG CCGCCCGCGC GGATCGACTC GGTCGCGCTG ACGGTGCGCG TGTGGGGCGA ATGGCGGCTC ATCGCGCTGA CGTTCGTCGG GCTCGCGTTC GTCGCGGGAT TCTCGGCGTG GCTGCCCGCG CGCCACGCGG CGCGGCTGTC GATCATCGAC GCGCTGCGCT ATGCGTGA
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Protein sequence | MHTFMLALRN LQRNRRRSIT TLLAMVVGVC AVLLFGGFSK DITFGLQTDF VRRSGHLQIQ RHGYYQYGSG NPVAYGIGGY ARLIAQLRDD PVLAPMIAVI TPTLQFGGIA GNFEAGVSRT VLAQGAIADE QDRMQQWNDY GFPLTPKPYP LVGTAPDAAI VGNGVARVLH LCAPLRVPDC GDGDVARQPA PQAASGASGA DAPADVLALA AAEAHAQESG RGERAGAAHI EVLAANAYGA PNVGGFTVAK AEQQGVKELD DVYLAMHLPR AQRLVYGGDA PRVTAIEIQL RHTAQLPAAR ARLDRLFGGR FEGQPLDVLD FAALNPFYDQ TNRMFSMIFG FVFVLIGAIV LFVVSNTMST AILERTVEIG TLRSMGVRRG GIQALFVCEG ALLGVVGASI GVLVALALAF VVNHSGLAWT PPARIDSVAL TVRVWGEWRL IALTFVGLAF VAGFSAWLPA RHAARLSIID ALRYA
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