| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A3226 |
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| Symbol | |
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| ID | 4886880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | + |
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| Start bp | 3052277 |
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| End bp | 3053590 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640133162 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | YP_001064217 |
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| Protein GI | 126444723 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.107526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCGGC TGGGTTGCGT TGTTACCCGC TCACGAAAAA AGCCGTACGC TCGCGCGCCG
CGCTCTTGTG CGGCGCGCGA GCGTGACGAG CGTGACGAGC GTGACGAGCG TGACGAGCGT
GACGAGCGTG ACGAGCGTGA CGAGCGTGAC GAGCGTGACG AGCGTGACGA GCGTGACGTG
CGGGACGTGC GTGACGTGCG TGACGTGCGT GACGTGCGGG ACGTGCGGGA CGTGCGGGAC
ATGCGCCATG AGCGTGACAG GCGCGGCGCG CATGACGCGT GCGGCGCGGC GGCGCGACGC
CCGGCAACTG CCATGCGTTG CGCCGCGAAG CGCACGTCGC GCCGAGCATG GGAAAACACG
CACCGTCCGC GCCGTCGCAA CCGGTCGGCC CGAACACGTT TCGAACAACC CAAGGAACGG
CCCTTGCGAC ATCCAGGCTC CAGGCTCACC CGGTTCCGGC TCGCGGCGGC GGCCTGCTGT
CTCGCATTGG CAAGCGCCGC GCGCCCCGCG TTCGCCGGCG CGAACGCGCC CGCCGCCGCC
GAGCCGCCCA CCGATGCGCA GCGCCCCGCG ATCCTCGTCT ATCACCGCTT CTCGTCGTCC
GCGCCGCCCG ATTCGATGAC CGTGCGCGTC AGCACGTTCG GCGCGCAGCT CGCGTTCCTG
CGCGCGCACG GTTACACGTT CGTACCGCTG CGCGACGTCG TCGCGTGGGC GGCTTCGCCG
TCCGCGCCGC TGCCGGACAA GGCGATCGCG ATCACCGTCG ACGACGGCCA CCGCTCGGTG
TACGAACTGC TGCGCCCGAT CGTGCTGCGC GAGCGGCTGC CCGTCACGCT GTTCATCTAT
CCGTCCGCGA TCTCGAACGC GTCGTATGCG ATGACATGGG ACGAACTGCG CGCGTTGCGC
GCCACCGGCC GCTTCGATAT CGAATCGCAC ACGTGGTGGC ATCCGAACTT CCGCACCGAG
CGGCGGCGCC TCGCACCCGA TGCGTTCCGC CGCTTCGCCT CGACCCAGTT CACCCATTCG
CGCGCGCGGC TCGAGCGCGA AATCGGCGGG CCGGTCGATC TGCTCGCATG GCCGTTCGGC
CTCTACGACG ATGAGCTGAC GTCGCTCGCC GCGCAGGCGG GCTACGTCGC GGGCTTCACG
CTCGACGCGC GCAAGGTTCG TCGCGGCGAC GCGCCGCTCG CGCTGCCGCG CTTGCTGATC
GTCGACAGTT GCACGCCGGC CGTGCTGGCG CGGATGCTCG GCGAACGCGG CGACGCGCGT
GCCGATTCGC ACGCCGATTT ACACGTCGAT TCACACGCGG AGCAATCGCG ATGA
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| Protein sequence | MIRLGCVVTR SRKKPYARAP RSCAARERDE RDERDERDER DERDERDERD ERDERDERDV
RDVRDVRDVR DVRDVRDVRD MRHERDRRGA HDACGAAARR PATAMRCAAK RTSRRAWENT
HRPRRRNRSA RTRFEQPKER PLRHPGSRLT RFRLAAAACC LALASAARPA FAGANAPAAA
EPPTDAQRPA ILVYHRFSSS APPDSMTVRV STFGAQLAFL RAHGYTFVPL RDVVAWAASP
SAPLPDKAIA ITVDDGHRSV YELLRPIVLR ERLPVTLFIY PSAISNASYA MTWDELRALR
ATGRFDIESH TWWHPNFRTE RRRLAPDAFR RFASTQFTHS RARLEREIGG PVDLLAWPFG
LYDDELTSLA AQAGYVAGFT LDARKVRRGD APLALPRLLI VDSCTPAVLA RMLGERGDAR
ADSHADLHVD SHAEQSR
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