| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2918 |
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| Symbol | |
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| ID | 4888004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | - |
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| Start bp | 2768855 |
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| End bp | 2770312 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640132854 |
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| Product | sphingosine-1-phosphate lyase |
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| Protein accession | YP_001063909 |
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| Protein GI | 126443077 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.216588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGACCG ACGTCGGCAC GGCGAAGGAG AACGTCATGG ATCTGGAGGA AGGCATCAGG
CGGCTGTATC CGTATGCGGA GGAATTCGGC GTGATGCGCG GCTTCCCGGA ACAAGGAACG
CCGCGCGACG AACTGCTCGC GCAGTTGCGC TCGATGGCCG AGCGCGAGGA TCGCAACTGG
GAGAGCGGGC ATAGCTCGGG CGCGATGTAT TCCGGCGATC GCGACCATCA TGCATGGCTG
AACGAAGCGT ATTCGGTCTT CAGTCACGTC AACGCGCTGC GGCGCGACCT GTGCCCGAGC
ATGAACCGGA TGGAAAGCGA GATCGTCGGC ATGACGGTTG CAATGCTGCA CGGCGATGCG
GTGGCCGCGC ACCACCCCGG GCAGCGCGCG TGCGGGATGA TCACGCTCGG CGGCACCGAG
AGCATCCTGG GCGCGACGCT TGCGTATCGC GAGAAAGCGC GCGCCGAGCG CGGCATCGGG
CGGCCGCGGA TGATCTGGCC GGCGTCCGCG CATCCGGTGT TTCGCAAGGC CGCGCATCTG
TTCGGCTTCG ACGTGACCGT CGCGCCGGTC GATCCCGTCA CGATGCAGGT CGATGCCGAT
TTCGTGCGCG ACGCGGTGGA CGCGAATACG GTGATGCTCG TGGGCTCGGC ATGCAATTAT
CCGTACGGCA CGATCGATCC GATCGGCGCG CTGTCGGCGA TCGCCGTCGA AAAGGACGTG
TGGCTGCACG TCGACGGCTG CCTCGGCGGC TGGATGCTGC CGTGGGGCGA AGCGCTGGGC
TATCCGGACA TTCCGGCATT CGATTTTCGT CTGCCGGGCG TCACGTCGAT CTCGGCCGAT
ACGCACAAGT TCGGCTACGG CCCGAAGGGC GGCTCGGTGC TCGCGTGGCG CGACGCGAGC
TTTCGGCGCC ATCAGTATTT TCTGATGACC GATTGGGTGG GCGGCGTCTA TGGCTCGCCG
GGATTGACGG GCAGCCGCTC GGGCGGCCTG ATCGCGGCGA CATGGGCGGC GCTGCGTGGC
CTCGGGCGCG AAGGCTACCT CGCGCGGGCG AAGGCGATCT TCGAGACGGC CTTCGACATG
CAGGCCGCGG TGCGTGCGAT TCCGGAGCTG CGCGTGCTCG GCAAGCCGAC GTTCTGCTTC
GCGTTCGCCT CGGACGCGTT CGACATCTAT CACGTGAACG ATTTCATGCG GCAGCGCGGC
TGGCGTCTCA ATGGCTTGCG GCGCCCCGAT GCGTTGCAGA TGTGCGTGAC GGGGCCGCAG
ACGCAGCCGG GCGTCGCCGA GCAGTTCCGG CGCGATCTCG GCGCGGCGGC GGATTACGCG
CGCGCTCACG CGCAGGAGCG CCCGAAGACG AGCGGCGTCT ACGCGAGCGA TGCGGCCGGC
GTCGATCTGA GCGACGATGC GCGAACGAGG GCGTTCTTCA CGCAGGTGAT CGATCTGTTC
ACGGATTGCC CGCTTTAA
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| Protein sequence | MPTDVGTAKE NVMDLEEGIR RLYPYAEEFG VMRGFPEQGT PRDELLAQLR SMAEREDRNW
ESGHSSGAMY SGDRDHHAWL NEAYSVFSHV NALRRDLCPS MNRMESEIVG MTVAMLHGDA
VAAHHPGQRA CGMITLGGTE SILGATLAYR EKARAERGIG RPRMIWPASA HPVFRKAAHL
FGFDVTVAPV DPVTMQVDAD FVRDAVDANT VMLVGSACNY PYGTIDPIGA LSAIAVEKDV
WLHVDGCLGG WMLPWGEALG YPDIPAFDFR LPGVTSISAD THKFGYGPKG GSVLAWRDAS
FRRHQYFLMT DWVGGVYGSP GLTGSRSGGL IAATWAALRG LGREGYLARA KAIFETAFDM
QAAVRAIPEL RVLGKPTFCF AFASDAFDIY HVNDFMRQRG WRLNGLRRPD ALQMCVTGPQ
TQPGVAEQFR RDLGAAADYA RAHAQERPKT SGVYASDAAG VDLSDDARTR AFFTQVIDLF
TDCPL
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