| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2775 |
|---|
| Symbol | |
|---|
| ID | 4887145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 2645947 |
|---|
| End bp | 2647020 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640132711 |
|---|
| Product | type I antifreeze protein:HlyD family secretion protein |
|---|
| Protein accession | YP_001063767 |
|---|
| Protein GI | 126442948 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCAAG TCACCAGGAA GCAGATCGTC GCCGCGGCGG CCGTCGTCGT GGTCGCGCTC
GGCGCTTACT ACGGCTGGAC GCTGCTGCGC CACCAGGGCC CCGGCGACGG CTTCGCGAGC
GGCAACGGCC GCATCGAGGC CACCGAGATC GACGTCGCGA CGAAGCTGCC CGGGCGCATC
GATGCGATCC TCGTCGACGA GGGCGATTTC GTGAAGGCCG GCCAGCCGCT CGCGAACATG
CAGATCCAGG TGCTGCGCGC GCAGTACGAC GAAGCGACCG CGCAGCGGCA GCGCGCGCTG
AACACCGCGG CCGGCGTGCA ATCGCAGGTC GCGCAGCGCA AGAGCGACAA GGCGGCCGCG
CAGGCGATGG TCGTGCTGCG CGAAAGCGAA CTCGACGCGG CCGAGCGCCG GCTCGCGCGC
TCGCAAACGC TATCGCGCGA AGGCGCGTCG TCGCTGCAGG AGCTCGACGA CGATCGCGCG
CGCGCGCGCA GCGCGCAGGC GGCCGTGTCC GCGGCGGCCG CGCAGGTGGC CGCCGCGCAG
GCCGCGATCG AGGCGACCGA GGCGCAGCTC GTCGCCGCGC ATTCGGCTGT GACGGCGGCC
GACGCCACCG TCGCCCGCGT ACAGGCCGAC ATCGACGACA GCCAGCTCGC ATCGCCGCGC
GACGGCCGCG TGCAGTACCG CGTCGCGCAG CCGGGCGAAG TGCTGCCGGC GGGCGGCAAG
GTGCTCAATC TCGTCGACCT GTCGGACGTC TACATGACGT TCTTCCTGCC GGAGACGGTC
GTCGGCCGGG TCGCGCTCGG CGCCGACGCG CGCATCATCC TCGATGCCGC GCCGAACTAC
GTGATTCCCG CCACCGTGTC GTTCGTGTCG AGCACCGCGC AGTTCACGCC GAAGACCGTC
GAGACCGCGA ACGAACGGCA GAAGCTGATG TTCCGCGTGA AGGCGCGCAT CGATCGCGAG
CTGCTGCAAA AGCACCTGAA GCTCGTGAAG ACCGGGCTGC CCGGCGTCGC GTGGGTGCGC
GTCGACCCGA GCAAGCCGTG GCCCGCGCAA CTGATGGTCA AGGTTCCGCA GTGA
|
|---|
| Protein sequence | MIQVTRKQIV AAAAVVVVAL GAYYGWTLLR HQGPGDGFAS GNGRIEATEI DVATKLPGRI
DAILVDEGDF VKAGQPLANM QIQVLRAQYD EATAQRQRAL NTAAGVQSQV AQRKSDKAAA
QAMVVLRESE LDAAERRLAR SQTLSREGAS SLQELDDDRA RARSAQAAVS AAAAQVAAAQ
AAIEATEAQL VAAHSAVTAA DATVARVQAD IDDSQLASPR DGRVQYRVAQ PGEVLPAGGK
VLNLVDLSDV YMTFFLPETV VGRVALGADA RIILDAAPNY VIPATVSFVS STAQFTPKTV
ETANERQKLM FRVKARIDRE LLQKHLKLVK TGLPGVAWVR VDPSKPWPAQ LMVKVPQ
|
|---|
| |