Gene BURPS668_A2577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A2577 
Symbol 
ID4886244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp2483660 
End bp2485303 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content71% 
IMG OID640132514 
Productalpha amylase family protein 
Protein accessionYP_001063570 
Protein GI126443700 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0296] 1,4-alpha-glucan branching enzyme 
TIGRFAM ID[TIGR02402] malto-oligosyltrehalose trehalohydrolase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAAT GTCCTCATGA TCCGTATGCG CAGCATCACT CGCATTGCCT GCCGTTCGGC 
GCCCAGCCCT GCGGCGCCGC GGGCGCGACG ACACGTACTC ACTTTCGCGT CTGGGCGCCC
GCGCATGCGG CCGTGACGCT CGCGCTCGAC ACCGCGGGCG GCCTGCATGA ATTGCCGATG
GCGCCCGCGG GCGACGGCTG GTTCGAGACG TTCGCCGATT GCGGCGCGCA TACGCGCTAC
CGGTATCGGC TCGACGAGGC GCTGACGATC CCCGATCCGG CGTCGCGCTC GCAGCCGGAA
GGCGCCGACG GGCCGAGCGA GGTGATCGAT CCGCGCGCGT TCACGTGGCG CCACACGTTC
TGGCGTGGCA GGCCGTGGGA GGAGATCGCG CTCTACGCGA TCCAGCCCGG CGCGGCGGGC
GGTTACGACG GTGTCCGTGA GCGCTTGCCG CAGCTCGCGC AGTTGGGCGT CACCGCGCTC
GAGTTGCTCG CGGCGCCGCA GGCGCGCGAC GACAGCCTGC CGTTCGCGCC GATCGCCGCA
TACGGCGGCG TCGACGCGCT CAAGCGCCTG ATCGACGAGG CGCACGGTTT CGGCCTCGCG
GTGCTGCTCG ATCTCGACTA TGCGCGCTTC GGCTGCGGCT CCGATGAAAT GCGGCGCTAC
GCGCAGCCGT TCTTCCACAC CCGCGACGAT CCGCTGCAGG CGCCGCCGCT CGCGCTCGAC
CACCCGCAGG TGTGCGACTT TTTCTGCGAC AACGCGCTGT ACTGGCTCGA AGAATATCGA
TGCGACGGCT TGCGGATCCG CGAGGCGGAC CGCATCGACA GCGCGTGGCT GCGCGAGATC
GCCGATCGCG TGCACGCGGC GATGCCGACC GACCGGATCG TGCACCTCGT GCTCGGCAGC
GAGCGGCATC CGTCGCACCT CGCCGACACG CATTTCGACG CGCAATGGAA CGGTTGCGGC
GAGCGCGCGC TGTACCGGCT GACGGGGCGC CGCGATCGCG CGCACGGCGA CGGCGTGTCG
ACGCATCAGT CGATCCATGC GCTCGCGCGC GCGTTGACCG CGAACGGCGC GGTGTTCCAG
CGCGCGCATC CGGCCGGCGA AGGCGGGATG GCCGACGTCG GCCTGCCGCT GACCTCGCTC
GTGCTGTCCG ACGGCGTCGT GCGCGACGCG CGCGAGGCGG ATCTCGCGGC GCTCGCGCTG
TCGCTGCTGA CGCCGCAGAT TCCGCTGATC TTCGATGAAG CCGCGGGCGA CGCGTCGCGG
CGCCATTTCG TGCAATCGGC GCTCGCGGTG CGCGCGAAGC TGATCGCGCC GCGTCTGATC
GACGTGCGGC CGCGCCGCGC CGACATGCTG CGCGCGGCCG ACGGCGTCGA GGCCGATGCG
CTTGTCGCCG CATGGCGGCT CGGCGACGGC GAGACGCTCA GCATCGCGCT GAACCTGTCG
CCGCAGGCGT TGCCGTTTCA TGGCGCGCCG GACGGAACGA TCGTGTTCGA AACGCCGGCG
CGCGCGCGGG ATCGCGTCGA CGCGAGTGTG CTGCCGCCGT ATGCGCTTGT CGCGTGGCTG
ACGGGCGACG TCAATCAGTA CGCGCTGACG CACGATGTGC GTCGTTACGC GGATGTCGCC
CCGCACTCGC CGGGCGGCGC TTGA
 
Protein sequence
MSECPHDPYA QHHSHCLPFG AQPCGAAGAT TRTHFRVWAP AHAAVTLALD TAGGLHELPM 
APAGDGWFET FADCGAHTRY RYRLDEALTI PDPASRSQPE GADGPSEVID PRAFTWRHTF
WRGRPWEEIA LYAIQPGAAG GYDGVRERLP QLAQLGVTAL ELLAAPQARD DSLPFAPIAA
YGGVDALKRL IDEAHGFGLA VLLDLDYARF GCGSDEMRRY AQPFFHTRDD PLQAPPLALD
HPQVCDFFCD NALYWLEEYR CDGLRIREAD RIDSAWLREI ADRVHAAMPT DRIVHLVLGS
ERHPSHLADT HFDAQWNGCG ERALYRLTGR RDRAHGDGVS THQSIHALAR ALTANGAVFQ
RAHPAGEGGM ADVGLPLTSL VLSDGVVRDA READLAALAL SLLTPQIPLI FDEAAGDASR
RHFVQSALAV RAKLIAPRLI DVRPRRADML RAADGVEADA LVAAWRLGDG ETLSIALNLS
PQALPFHGAP DGTIVFETPA RARDRVDASV LPPYALVAWL TGDVNQYALT HDVRRYADVA
PHSPGGA