Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A2535 |
Symbol | ispA |
ID | 4887294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 2447869 |
End bp | 2448753 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640132472 |
Product | geranyltranstransferase |
Protein accession | YP_001063528 |
Protein GI | 126442384 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTCG ACCAATGGAT GCGCTCGGTG CTCGAGCGTG TCGAGACGGC CCTCGGCCAT TATTTACCGG CCGGGACTGT GGCGCCCGCG CAACTGCACG AAGCGATGCG CTATGCGGTG CTCGGGGGCG GCAAACGCGT GCGTCCGCTG CTGTGCCATG CGGCGGGCGA GCTCACGGGC GCGTCGGAGG CGGCGCGTGA CGCGGCGTCG GCTGCGCTCG AGATGATTCA CGTGTATTCG CTCGTGCATG ATGATATGCC GTGCATGGAT GACGACGCGC TGCGTCGCGG CAAGCCGACC GTCCACGTCA AGTACGACGA GCCGACCGCG CTGCTCGTCG GCGACGCGCT GCAGTCGCAG GCTTTCGTCG CGCTGACCGA CGCCGCCGCG CTGCCGGCCG ACCGGCAGGC GGCGCTCGTG CGCGAGCTCG CGCTCGCGAG CGGCTCGATC GGCATGGCGG GCGGCCAGGC GATCGATCTC GCGAGCGTCG GCGTGGCGCT CACGCGCGAC GCGCTGGAGA CGATGCATCG GATGAAGACG GGCGCGCTGT TGCGCGCGTC GGTGCGCATG GGCGCGCTCG CGGGCGAGAC GCCGTCCGGC GACGCGATGC GCGCGCTCGA CGCCTATGCG GCGGCCGTCG GCCTGGCGTT CCAGGTGGTG GACGACATTC TCGACGTCAC CACCGATTCC GCGACGCTCG GCAAGACGGC CGGCAAGGAC GCGGCGAACG ACAAGCCGAC CTACGTGTCG ATCATCGGTC TCGACGCGTC GCGCGCGCTT GCCGCGCAAT TGCGCGCCGA TGCGCACGCC GCGCTCGAGC CGTTCGGCGC GCGCGCGCAG CGCCTGGCCG AACTGGCGGA CCTGGTGGTG AACCGGGTCA GCTGA
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Protein sequence | MTFDQWMRSV LERVETALGH YLPAGTVAPA QLHEAMRYAV LGGGKRVRPL LCHAAGELTG ASEAARDAAS AALEMIHVYS LVHDDMPCMD DDALRRGKPT VHVKYDEPTA LLVGDALQSQ AFVALTDAAA LPADRQAALV RELALASGSI GMAGGQAIDL ASVGVALTRD ALETMHRMKT GALLRASVRM GALAGETPSG DAMRALDAYA AAVGLAFQVV DDILDVTTDS ATLGKTAGKD AANDKPTYVS IIGLDASRAL AAQLRADAHA ALEPFGARAQ RLAELADLVV NRVS
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