| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2503 |
|---|
| Symbol | |
|---|
| ID | 4885886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 2417373 |
|---|
| End bp | 2418893 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640132440 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_001063497 |
|---|
| Protein GI | 126444443 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCCTCT CCGACTGGCT TGCCGCGCGA CTCGAGCGGC ACTCGGCCGA GCCGATGTAC
CGGCAACTGC TGCGGCTGAT GCAGCAGGCG ATCCTCTCGG GGGAGCTCAC GCCCGGCACG
AAGCTGCCGA GCTCGCGCAC GCTCGCCACC GATCTCGCGA TCGCGCGCAA CACCGTGCTG
CACGTGTACG ACCAACTGAC GACGGAAGGC TACGTGCTGA CGACGACGGG CAGCGGCACC
TACGTCGCCG ACACGCGCCC CGATGCCGCG GCGATGCGCG CGCAAGCCGG CGCGCCCGCG
CATCCGTCAG ACGAAACGCG CGACGCGCAG CAGCGCGCGC ACGGCGCACT GTCGGCGCGC
GGCGCGCAAC TGATCCGGCA CGCGGGCGTG TCGCGCCGCC AGTGGGGCGC GTTCATGCCG
GGCGTGCCCG ACGTGTCCGA GTTTCCGACG CGTACATGGA GCCGCCTGCA GGCGCGGCTG
TGGAAGGAAG CGAATCCGGA GCTGCTGACC TATGCGCCGG GCGGCGGCTA CCGGCCGTTG
CGGCGCGCGC TGTCCGACTA CCTGCGTGTC GCGCGCTCGG TCAAATGCTC GCCCGATCAG
ATCATCATCA CGACGGGCAT TCATCAGTCG ATCGACCTGT CGGTGCGCCT GCTCGCCGAC
GTCGGCGATC GCGCGTGGGT CGAGGAGCCG TGCTACTGGG GCGTGCGCAG CGTGCTGCAG
GCGGCGGGGC TCGCACTCGC GCCCGTGCCC GTCGATCAGG AAGGGCTCGC GCCGCGCGCG
CAGGACCTGA AGCGCCCGCC GCGGCTCGTG CTCGTCACGC CATCGCATCA ATATCCGCTC
GGCATGGTGA TGAGCCTCGC GCGGCGCCGG ATGCTGCTCG AATATGCGCG GCAGCATCAA
TGCTGGATCA TCGAAGACGA CTACGACAGC GAGTTCCGCT ACGGCAGCCG TCCGCTCGCG
TCGCTACAGG GGCTCGACGA CGCGGGCCGC GTGATCTACG TCGGCAGTCT CGGCAAGATG
CTGTTCCCGA GCCTGCGCCT CGGCTACATG GTCGTGCCCG AGCACCTCGT CGAGACCTTC
CGGACCGGGC TGTCGGAGCT GTATCGCGAA GGGCAACTGA TGCAGCAGGC GGTGCTCGCC
GAATTCATCA TGGACGGCTA TCTGACGTCG CACGTGCGCC GGATGCGCGC GCTGTACGGC
GAGCGCCGCC AGTTGCTGAT CGACGCGATC CACGCGCGCT TCGGCGATGC GCTGCCGGTG
ATGGGCGACG AGGCGGGCCT GCACCTCGTG ATCGGATTGC CGAACGGCTG CGACGACCGG
GCGATCACGC AGACCGCATT CGACGCGGGG GTGATCGTGC GCCCGCTCAC GACGTACTAC
AACCATGCGG ATACCGCGCG CGAGGGATTG CTGCTCGGCT ACGCATGCGT GCCGAACGAG
CGCATCGCGC CCGCGTTCGA TACGCTCGCG CAGATAATCG AAGCGCATCT GAATCGGCGT
GCGAAGCAAC GGGCCGCGTG A
|
|---|
| Protein sequence | MILSDWLAAR LERHSAEPMY RQLLRLMQQA ILSGELTPGT KLPSSRTLAT DLAIARNTVL
HVYDQLTTEG YVLTTTGSGT YVADTRPDAA AMRAQAGAPA HPSDETRDAQ QRAHGALSAR
GAQLIRHAGV SRRQWGAFMP GVPDVSEFPT RTWSRLQARL WKEANPELLT YAPGGGYRPL
RRALSDYLRV ARSVKCSPDQ IIITTGIHQS IDLSVRLLAD VGDRAWVEEP CYWGVRSVLQ
AAGLALAPVP VDQEGLAPRA QDLKRPPRLV LVTPSHQYPL GMVMSLARRR MLLEYARQHQ
CWIIEDDYDS EFRYGSRPLA SLQGLDDAGR VIYVGSLGKM LFPSLRLGYM VVPEHLVETF
RTGLSELYRE GQLMQQAVLA EFIMDGYLTS HVRRMRALYG ERRQLLIDAI HARFGDALPV
MGDEAGLHLV IGLPNGCDDR AITQTAFDAG VIVRPLTTYY NHADTAREGL LLGYACVPNE
RIAPAFDTLA QIIEAHLNRR AKQRAA
|
|---|
| |