| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2501 |
|---|
| Symbol | |
|---|
| ID | 4888072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 2415034 |
|---|
| End bp | 2416080 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640132438 |
|---|
| Product | putative polyamine ABC transporter, periplasmic polyamine-binding protein |
|---|
| Protein accession | YP_001063495 |
|---|
| Protein GI | 126442876 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACCACA CGTTCAACAC GCCGCGCCGC GCGGTTGCGC TGCTGTCGCT CGCCGCGTTC
TGCGCGACGG CCGGCGCGGC CGAGCTGACC GTCGTCAATT TCGGCGGCGC GAACGGCGAC
GCGCAGAAGG CCGCGTTCAA CCAGCCGTTC GAGAAGGCGA CCGGCAACAA GGTGACGGCC
GTCGAATACA ACGGCGAGCA GGCGAAAGTG AAGGCGATGG TCGAGGCGAA GCACGTGAAC
TGGGACGTCG TCGAAGTCGA GTCGGGCGAC CTGAACCGCG GCTGCGACGA AGGCCTGTAC
GAGAAACTCG ACTGGGCGAA GATCGCGAAG AAGTCCGATC TGATTGCCGA ATCGCCGCAA
ACCTGCGGCG TCGGTTTCTT CGTGTGGTCG ACCGCGCTTG CATACGACGC GGACAAGCTC
AAGCGCGCGC CCGCCGGCTG GGCCGATTTC TGGGACGTGA AGAAATTCCC GGGCAAGCGC
GGGATGCGCA AGGGCGCGCG CTACAACCTC GAGTTCGCGC TGATGGCGGA CGGCGTCGCG
CCGAAGGACG TCTACAAGGT GCTCGCGACG AAGGCGGGCC AGGATCGCGC ATTCAAGAAG
CTCGACGAGC TGAAGCCGAA CATCCAGTGG TGGGAAGCGG GCGCGCAGCC GCCGCAGTTC
CTCGTCGCGG GCGACGTCGT GATGTCGACC GCGTACAACG GCCGAATCAG CGCCGCGCAG
AAGGAAGGCA AGAACCTGAA GGTGGTGTGG AGCGGCAGCA TCTACGATCT GGACTACTGG
GCGATTCCGA AGGGCACGCC GAACAAGGCG CTCGCCGAGA AGTACATCGC CTACACGCTG
TCGTCGAAGC CGCAGCAGGA TTACGCGCAA CACATCGCGT ACGGCCCCGC GAATGTCGCC
GCGATCAAGG CGCTCGACGC GAAGACGCTC GCGAACCTGC CGAACTCGCC GGCCAACGGC
AAGAACGCGG TGCTGCAGAA CATCACGTTC TGGACCGATC ACGGCGACGA GCTCGAGCAG
CGCTTTGCGG CGTGGGCGTC GAAGTGA
|
|---|
| Protein sequence | MHHTFNTPRR AVALLSLAAF CATAGAAELT VVNFGGANGD AQKAAFNQPF EKATGNKVTA
VEYNGEQAKV KAMVEAKHVN WDVVEVESGD LNRGCDEGLY EKLDWAKIAK KSDLIAESPQ
TCGVGFFVWS TALAYDADKL KRAPAGWADF WDVKKFPGKR GMRKGARYNL EFALMADGVA
PKDVYKVLAT KAGQDRAFKK LDELKPNIQW WEAGAQPPQF LVAGDVVMST AYNGRISAAQ
KEGKNLKVVW SGSIYDLDYW AIPKGTPNKA LAEKYIAYTL SSKPQQDYAQ HIAYGPANVA
AIKALDAKTL ANLPNSPANG KNAVLQNITF WTDHGDELEQ RFAAWASK
|
|---|
| |