Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A2416 |
Symbol | |
ID | 4887907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 2335795 |
End bp | 2337087 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640132353 |
Product | outer membrane porin |
Protein accession | YP_001063410 |
Protein GI | 126444975 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.163493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTTGATA TAAAACGACT TTCCATCGCT GTCACCTTTT TGAGACACTT TATTTTTTTG GATTTCTTGC GTCTGGTGCA GTGCGCTATT CTCCAATCCG CAACAAATAA CGAATCACTC GCGTGGAGAA ATAACTCGAT GAAGAAACTC GCTCTGTCTA CCCTCTCGCT CGCGCTGCTG GGCGCAGCCG GTGCAGCTCA GGCTCAAAGC AGCGTCACGC TGTACGGCGT GATTGATACG TCGATCACTT ATGTCCACGG CAACGACGGC AAGGCCAACA ACGCCTGGCT GATGGGCAGC GGCAACCTGC AAGGCAGCCG CTGGGGCCTG AAGGGCACCG AGGATCTCGG CGCCGGCCTG AAGGCGATCT TCCAGTTGGA AAATGGCTTC AACTCGAACG ACGGCACGCT CGGCCAAGGC AAGCGCATGT TCGGCCGCCA GGCGTTCGTC GGTCTGCAGC ATGACCAGTA CGGCACGCTG ACGCTCGGCC GTCAGTACGA TCCGCTCGTC GACCTCGTGC AACCGGTGAC GGCCGACAAC TACTTCGGCA GCCTGTTCGC CACCCCGGGT GACGTCGACA ACAACGACAA CAGCCTGCGC GTGAACAACA CGGTCAAGTA CACGTCGCCC GTGTTCGCCG GCTTCCAGTT CGAAGCCCTG TACGGCTTCA GCGGCATCGC GGGCTCGCCG GGCCAAGGCC AGACGTGGTC GGCCGCCGCC GCATACAACA ACGGCCCGAT CGGCGTCGCG GCCGGCTACT TCTACACGTC GAACCCGTCG CCGACGGCCG GCTCGCGCTC GACGTGGAGC GGCTCGTCCG ACGCGATCTT CGACGGCGCG ATCAACAGCG GCTACACGAG CGCGAAGTCG ATCGGCATCG CACAGGTGGC CGGCCAGTAC GTGTTCGGCC CGGTCACGGT CGGCCTCGGC TACAGCAACG CGCAATACAA GCCGGACGGC TTCTCGGGCT TCTCGTCGAC CGAGAAGTAC AACACGGGCC GCGGCTTCGT GACGTACCAG GCCACGCCGG CGCTGCTGCT CGGCCTCGGC TACGCATACA CGAAGGCGAG CGGCGACACG GACGCGAAGT ACCACCAAGT GTCGATCGGC GCGGACTACG CGCTGTCCAA GCGCACGGAC GTCTACCTCG CCGGTGCGTA CCAGCACGCG AGCGGCACGC AGCGCGTCGA CGCGACGACG ACGCAAACGG CGCAGGCATC GATCGGCTCG TACGGCGTGA ACGGTACGAA GTCGCAAGAG ATGGTGGCTC TGGGCCTGCG CCACAAGTTC TAA
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Protein sequence | MVDIKRLSIA VTFLRHFIFL DFLRLVQCAI LQSATNNESL AWRNNSMKKL ALSTLSLALL GAAGAAQAQS SVTLYGVIDT SITYVHGNDG KANNAWLMGS GNLQGSRWGL KGTEDLGAGL KAIFQLENGF NSNDGTLGQG KRMFGRQAFV GLQHDQYGTL TLGRQYDPLV DLVQPVTADN YFGSLFATPG DVDNNDNSLR VNNTVKYTSP VFAGFQFEAL YGFSGIAGSP GQGQTWSAAA AYNNGPIGVA AGYFYTSNPS PTAGSRSTWS GSSDAIFDGA INSGYTSAKS IGIAQVAGQY VFGPVTVGLG YSNAQYKPDG FSGFSSTEKY NTGRGFVTYQ ATPALLLGLG YAYTKASGDT DAKYHQVSIG ADYALSKRTD VYLAGAYQHA SGTQRVDATT TQTAQASIGS YGVNGTKSQE MVALGLRHKF
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