| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2302 |
|---|
| Symbol | poxB |
|---|
| ID | 4887945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 2243659 |
|---|
| End bp | 2245377 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640132239 |
|---|
| Product | pyruvate dehydrogenase |
|---|
| Protein accession | YP_001063296 |
|---|
| Protein GI | 126444020 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGCA CGATTGCCGA CTACCTCGCG CGGACGCTGG CCGCCGCCGG CGTCACGAAG
ATCTGGGGCG TGACGGGCGA CAGCCTGAAC GGATTGTCCG ACAGCCTGCG CCGCGACGGC
GGCATTCGCT GGATGCATAC CCGGCATGAA GAGGTGGCGG CGTTCGCCGC GGGCGCCGAA
GCGGCGCAGA CCGGCCGGCT GGCCGTATGC GCGGGCAGTT GCGGGCCGGG CAATCTGCAT
CTGATCAACG GCTTGTTCGA TTGCCATCGC AATCATGTGC CGGTGCTCGC GATCGCCGCG
CAGATTTCGT CGACCGAAAT CGGGCTCGGC TATTTTCAGG AAACGCATCC GCAGGAACTG
TTTCGCGAAT GCAGCCATTA CGTCGAGCTC GTGACGAACG CGTCGCAATT TCCGCGCGTG
CTCGAGCGCG CGATGCGCGC CGCGATCGGC GAGCACGGCG TCGCGGTGAT CGTGCTCCCG
GGCGATGTCG CGCTGAGCGC GGCGCCCGCG CGAACACCGC CGTGGTTCGA TTTCACCTCG
CCGGTGACGA CGCCCGCCGA CGCCGATCTG GAGCGGCTCG CGGCGTTGCT CGACGGCTCC
GATGCAGTCA CGCTGCTGTG CGGCAGCGGT TGCGCGGGCG CGCACGACGA AGTCGTCGCG
TTGGCCGATG CGCTCGCGGC ACCCGTCGTG CATGCGCTGC GCGGCAAGCA GCACATTGAA
TACGACAATC CGAACAGCGT CGGCATGACG GGGCTGATCG GCTTCAGCTC CGGCTATCAC
GCGATGCAAT CGTGCGACAC GCTGCTGATG CTCGGCACCG ATTTCCCCTA TCGCAATTTC
TATCCGACGC GCGCCCGGAT CGCGCAGATC GACCGCCGCG CGTCGGCGCT CGGCCGTCGC
GCGCCGCTCG ACGTCGGCCT CGTCGGCGAC GTGCGCGCCA CGCTGTCCGC GCTGTTGCCG
CGCATCCGGC GCAAGACGCG GCGCGGTTTC GTCGAGCGTG CGCTTGCGCA TTATGCCGCC
GCGCGCAAGG GGCTCGACGA ACTGGCGAGA CCGTCGCCGG CCGGGCGGCC GATTCATCCG
CAGTACTTGA CGCGCGTCGT CGACGAGCTC GCCGCCGACG ATGCGAACTT CGCCGCGGAC
GTCGGCACGC CGACGCTGTG GGCGGCGCGC TATCTGACGA TGAACGGCCG CAGGCGGCTG
CACGGATCGT TCAATCACGG CTCGATGGCG AACGCGTTGC CGCAGGCGCT GGGCGCGCAG
GCCGCGCATC CCGGCCGGCA AGTCGTATCG CTGTCGGGCG ACGGCGGGCT GTCGATGCTC
CTCGGCGATC TGCTGAGCGC GCGGCAACTC GATTTGCCGA TCAAGGTGAT CGTCTACAAC
AACAGCTCGC TGGGCTTCGT CGCGATGGAG ATGAAGGCGG GCGGTTATCT GGATACGGGC
ACCGATCTGC ACGAGACCGA TTTCGCGGCG ATCGCGAAGG GGGCGGGCCT CTACAGCCTG
CGCGTGACCG AATCGGAAGC GTTGCCCGAT GCGCTCGGCA GGCTGCTCGC GCACCCGGGG
CCCGCGCTGC TCGACGTCGT CACCGACAAG CACGAGCTCG CGATGCCGCC GAAGATCGAA
TGGGCGCAGG CGAAGGGATT CAGCCTCTAC ATGTTGCGCG CGGTGCTGAG CGGGCGCGGC
GACGAAGTGC TCGAGCTCGC GCAGACGAAT CTGCGGTGA
|
|---|
| Protein sequence | MASTIADYLA RTLAAAGVTK IWGVTGDSLN GLSDSLRRDG GIRWMHTRHE EVAAFAAGAE
AAQTGRLAVC AGSCGPGNLH LINGLFDCHR NHVPVLAIAA QISSTEIGLG YFQETHPQEL
FRECSHYVEL VTNASQFPRV LERAMRAAIG EHGVAVIVLP GDVALSAAPA RTPPWFDFTS
PVTTPADADL ERLAALLDGS DAVTLLCGSG CAGAHDEVVA LADALAAPVV HALRGKQHIE
YDNPNSVGMT GLIGFSSGYH AMQSCDTLLM LGTDFPYRNF YPTRARIAQI DRRASALGRR
APLDVGLVGD VRATLSALLP RIRRKTRRGF VERALAHYAA ARKGLDELAR PSPAGRPIHP
QYLTRVVDEL AADDANFAAD VGTPTLWAAR YLTMNGRRRL HGSFNHGSMA NALPQALGAQ
AAHPGRQVVS LSGDGGLSML LGDLLSARQL DLPIKVIVYN NSSLGFVAME MKAGGYLDTG
TDLHETDFAA IAKGAGLYSL RVTESEALPD ALGRLLAHPG PALLDVVTDK HELAMPPKIE
WAQAKGFSLY MLRAVLSGRG DEVLELAQTN LR
|
|---|
| |