| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2270 |
|---|
| Symbol | |
|---|
| ID | 4885917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 2200353 |
|---|
| End bp | 2201795 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640132207 |
|---|
| Product | regulatory protein HrpB |
|---|
| Protein accession | YP_001063264 |
|---|
| Protein GI | 126444146 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCGA CACTCTATTT CGCCGCCGCC GCCGCGCTCG CCAACCCGTC TTCGAACGAC
GCCTACGCCG CGCGCGTGCT CGACGGCCGC TTCGCCGAAG CGGTCGCGCT CGTCGCCGCG
CGTTGCGACT CGCAGCCGGG CGACGCGGCC GCCGACGTGC GCGACGTTCA TGCGTACGCG
GACATCCAGC TCGTGCTCGG GCGCTTCGAG GAAGCCGAGG ACACGTTCCG CCGCGCGCAG
AAGCTGCTGC GCGAATCGCG CGACCAGACG CGCGTGATGA CCTGCCGCAA CGCGAGCTGG
CAGGCGTTCT TCCAGAACCG CTTCGGCGTG GCGCAGGCCG GGTTCCGGCG GATCGCCGAC
GATCGCGCGG CGAGTGCCGC GCAGAAGCTC GAGAGCCTCG TCGGCACGTG TGTCGTCATG
CACCATCTCG GCCGCGCCGA GGACGCGATG GCGACGCTCG ACGTGCTCGA CGCGGCCGCG
CGCGACGCCG ATGGGCGCTG GGTGCGGCTC GCGGCCGCGC TGCGCGCGGA TCTGCTGCTG
CAATACCAGA TCGGCCGCGC CGACGCGCTC GGCGATCACG TGTACTGGCG CTCGGCGCTC
GCCGAGCTGC CGCCGGCGGC GTTCGCGGAA ACGGGCGCGC CGCACGCCGC TTGCGCGGCC
GATGCGCCGC CGCTGCTGCG CATGCGCGTC GCCTACATGC GCGAGACGCG CGCGCTCGCC
GCGGGCGACC ACGCGGCGCT GGCGCGAATC GACACGCACG TGAGCTGGTG CGCGAAGGCG
GGCCTGGCCG ACTATCAGCG CAGCGTGCGC CTGGAGGTCG CGCTCGCCGC GCTCGCGGGC
CAGGCGCCGA ACGTCGCCGA CGCGATGATC GCGCCGTACC GCGAGGCCGC GGGGCGTTGC
GGCTCGCACG CGCGCTGGAC GCTCGACTAC CTGTACTGCG CGGCGAAGGT GCGCGAGCAA
CAGGGGCGGA TTCGCGAATC GTCGTCGCTG TACGCGCACT ATGCGCTCGC GTCGGTGCGG
CACGTGCGCT CCGACGGCGC GGCGCTCGCG CCGGCGCTCG CGATCGCGCG CTGCGGCACG
CAGGCGGCCG CGCCGAGCGA CGACGTGAGC GCGAGGCTGC CCGGCAAGTA CCGGCGCGCG
TATCGCTATC TGATGGAGCG GCTCGACCAG CGCGAGCTGT CGGTGCGCGA GATCGCCGCG
CACATCGACG TGACCGAGCG CGCGCTGCAG GCGGCGTTCA AGGCCTATCT CGGGCTGTCG
CCGAGCGAGC TGATCCGCCG TCAGCGGATG GAGCGGATTC GCGGCGAGCT GCTGTCCGAC
GCGCCGCGCG CGGCGAGCGT GCTCGAGATC GCGAGCCGCT GGGGAATCCA GCATCGGTCG
ACGCTCGTGA ACGGCTATCG GCGCATGTTC GACGAGGCGC CTTCGCAGAC GTTCGACCGA
TGA
|
|---|
| Protein sequence | MFSTLYFAAA AALANPSSND AYAARVLDGR FAEAVALVAA RCDSQPGDAA ADVRDVHAYA
DIQLVLGRFE EAEDTFRRAQ KLLRESRDQT RVMTCRNASW QAFFQNRFGV AQAGFRRIAD
DRAASAAQKL ESLVGTCVVM HHLGRAEDAM ATLDVLDAAA RDADGRWVRL AAALRADLLL
QYQIGRADAL GDHVYWRSAL AELPPAAFAE TGAPHAACAA DAPPLLRMRV AYMRETRALA
AGDHAALARI DTHVSWCAKA GLADYQRSVR LEVALAALAG QAPNVADAMI APYREAAGRC
GSHARWTLDY LYCAAKVREQ QGRIRESSSL YAHYALASVR HVRSDGAALA PALAIARCGT
QAAAPSDDVS ARLPGKYRRA YRYLMERLDQ RELSVREIAA HIDVTERALQ AAFKAYLGLS
PSELIRRQRM ERIRGELLSD APRAASVLEI ASRWGIQHRS TLVNGYRRMF DEAPSQTFDR
|
|---|
| |