Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A2182 |
Symbol | |
ID | 4888801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 2117334 |
End bp | 2118281 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640132119 |
Product | YscJ/HrcJ family type III secretion apparatus lipoprotein |
Protein accession | YP_001063176 |
Protein GI | 126442499 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.956943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGAT TCGTCTCTTT CTCGCTGCTG CCGGCGCTGC TGCTGCTCGC CGCATGCAAC CAGCAGGAGT TGCTGAAGAA CCTGACCGAG CAGCAGGCGA ACGACGTCGT CGCGGTGCTC CAGGCGCACG ATCTCGCCGT GCGCAAGGAG GACCTCGGCA AGACCGGCTA TGCGGTGAGC GTCGAGCAGG CCGACTTTCC GACCGCCGTC GATCTGCTGC GGCAATACAA CCTGCCGTCG CAGGCGCGCG TGCAGATCGC GCAGGCGTTT CCCGCCGACT CGCTCGTCGC GTCGCCGCAG GCCGAGCAGG CGAGGTTGCT GTCGGCCGTC GAGCAGCGCC TCGAGCAGAA TCTCGCCGCG CTGCAGAACG TCGTGAGCGC GCGCGTGCAG GTGAGTTATC CGCTCAAGCC CTCCGACAGC GGCAAGCCAG ACGCGCGGAT GCACGTGGCC GCCCTGCTCA CCTATCGCAA CGACGTGAAC GCGGACATCC TCGTGAGCGA AGTGAAGCGG TTCGTGAAGA ACAGCTTCAC GAACATCGAT TACGACGACA TCTCGGTGAT CCTGTATCGC GCGCCGTCGC TGTTCCGAGG CGCGCCGACG ATGCCCGCGT CGCATGCGGG CGGCGCGTGG CTCGCCTGGC TCGCGGCGAT TCCGGTCGCG CTCGCGGCCG CCGCCGCGGG CGGGCTCGCC TACCTGCGCC GCCGGCGCGC CGGCGGCCCC GATACGCCGG CTCGCGCGGC GCCGCGCGTC GAACCCGCGG CGTCGGGCGG CCCCGATGCA CGCGAGACGA CCGAGGTGCC GCCCCCGGGC GACGCATTCG ACATATCCGA TGCATCGGAC GCCTTCGATG CATCCGGCAC GTCCGCCTCG CCCGGCGCGG CTGCGGACGC CGCTGCGGCC GACGCGCCGG GCGCATCGCG CGGCGCGCCG TGGGAGCCGC GCCGATGA
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Protein sequence | MKRFVSFSLL PALLLLAACN QQELLKNLTE QQANDVVAVL QAHDLAVRKE DLGKTGYAVS VEQADFPTAV DLLRQYNLPS QARVQIAQAF PADSLVASPQ AEQARLLSAV EQRLEQNLAA LQNVVSARVQ VSYPLKPSDS GKPDARMHVA ALLTYRNDVN ADILVSEVKR FVKNSFTNID YDDISVILYR APSLFRGAPT MPASHAGGAW LAWLAAIPVA LAAAAAGGLA YLRRRRAGGP DTPARAAPRV EPAASGGPDA RETTEVPPPG DAFDISDASD AFDASGTSAS PGAAADAAAA DAPGASRGAP WEPRR
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