| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2179 |
|---|
| Symbol | |
|---|
| ID | 4886890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 2115415 |
|---|
| End bp | 2116701 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640132116 |
|---|
| Product | type III secretion system protein PrgH/EprH |
|---|
| Protein accession | YP_001063173 |
|---|
| Protein GI | 126445031 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02554] type III secretion system protein PrgH/EprH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.767802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAC CAGATTCCGG ACTTGAAGCT CTGCAACTCC GAATCCTGTT CGGTCCGCTA
TTCGGCTCGG ATATCGCGAT TCCGTCAGGG GAAGTATTTT TCTGCGTCGG CGATCAGGTG
ATCGACGATC GTCCGGCGGA GCATCCGGAA AATCGCGCCG GCCATTTACT GGAGCGCGCG
GTCGATACGC TGTATATCCC GCACCGGGCC GGCGCGCCGA ATTTCCGCCT GCGTTTTCCG
GGCGCACCGA CGCAGGCGGC GCGAACCGCC GAAACCGGCG AAGCCGCGCC CGGCGATTTC
GAAGTCGATT TTCTGTCGGC GGACGGTTGC GTCACGCAAC GCGCGGCATT CAACACCGTC
TGCCGCTTCG GCGATATCGC GTTCGCGCTC AGGCGTCAGC GCGAGCCATG GAGCGAGGCG
GTCATGCACT ACGCGCCGCA CGCGCCTTCG CGTGCGGCGG ACGCCGCCGA GCCGGGCGCA
CCCGGTGAGC CCGGCGATGG CGGCGAGCGC GCATCGCGCT TCGCGCTGAA GCTCGGCGCG
CTGCTCGTCG CGGGGGGCGC GCTCGCGGCG CTCGCGTACT GGCAGGTGCA GCGCTATGTC
GGCGCGCAGA AGCTCGCGAG CGTCAACGGC GTGCTGGCGG GCGCGCCCGT GCCCAACGCG
ATCCTGCCCG GCGACGACGG CCGGATCTAC GTGCTGAGCG CGTCGCAGGA CGGCGCCGAA
TGGGACCGCG AGGCGCTGCT GAAGGCGGCG CTGCCGGAGA AGATCGAAGT CGCCGTGATC
GGCGCGGAGC GGCAACGCGT CGAGCGCCGG CTCGACGAAG CCGGCGTCGA TTTCGTGACC
GTGCGCCTCG ACGCGCCCGA GCACCCGGAG CTGATCCTCA CCGGCGCCGC GCCCGCCGCC
GCGCGCGCAC GCGCGATCGG CGAGCTGCGG CGCGCGGCCC CGTACGTCCG GGACGTGCGC
GTGATCGACG CGAGCCTCGG CGCGATCGAG CAGGAGGCGC GCAACGCGCT CGACAAGGTG
GGCGCGCGCT ACCGGCTGCT CGCGCGGCGC GGCGGCGCGA CGTTCGAGGT GGCGAGCTCG
TTCGGCGACG AGGAGCTCGC CGCCTTGCAG AACCTCATGC GCTCGTTCGG CCACAAGTGG
GGCACGCGCC GCGTCGATTT CAAGATCGCG CTGCGCACCG ACTGGCTGAA GGGCAAATCG
TATCGGGAAG GCGGCGACGG CTACGTGCTG CTCGATCACG CGTCCTGGTA TTTCCCGCAA
CCCCTGGAAG GAGCACATTA CCGATGA
|
|---|
| Protein sequence | MNKPDSGLEA LQLRILFGPL FGSDIAIPSG EVFFCVGDQV IDDRPAEHPE NRAGHLLERA
VDTLYIPHRA GAPNFRLRFP GAPTQAARTA ETGEAAPGDF EVDFLSADGC VTQRAAFNTV
CRFGDIAFAL RRQREPWSEA VMHYAPHAPS RAADAAEPGA PGEPGDGGER ASRFALKLGA
LLVAGGALAA LAYWQVQRYV GAQKLASVNG VLAGAPVPNA ILPGDDGRIY VLSASQDGAE
WDREALLKAA LPEKIEVAVI GAERQRVERR LDEAGVDFVT VRLDAPEHPE LILTGAAPAA
ARARAIGELR RAAPYVRDVR VIDASLGAIE QEARNALDKV GARYRLLARR GGATFEVASS
FGDEELAALQ NLMRSFGHKW GTRRVDFKIA LRTDWLKGKS YREGGDGYVL LDHASWYFPQ
PLEGAHYR
|
|---|
| |