| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2165 |
|---|
| Symbol | |
|---|
| ID | 4886664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 2102987 |
|---|
| End bp | 2103730 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640132102 |
|---|
| Product | type III secretion protein SpaR/YscT/HrcT |
|---|
| Protein accession | YP_001063159 |
|---|
| Protein GI | 126444373 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4791] Type III secretory pathway, component EscT |
|---|
| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCGT TCTACCGGCA CGCCGGCGCG ATCGCGATCG CGTACGCGCG CGTCGCGCCG
GTGTTCTATC TGCTGCCGTT CCTGAACGAC CGGACGATCG TCAACGGCAT CGTGAAGAAC
ACGATCGTGT TCGCGATCAT CCTCGGGCTG TGGCCGAGCT TCGCGCATCC GCCGCTGCAA
GGCGGCGCGC TCGCCGGCGT CGCGCTGACG GAGGCGGCCG CGGGCGTCGT GCTCGGCGTC
GCGCTGTCGC TGCCGTTCTG GGTCGCGACG GCGGTGGGCG AGCTGATCGA CAACCAGCGC
GGCGCGACGA TCAGCGATTC GATCGACCCG GCGACGGGCG TCGAAGCGTC GGCGCTCGCG
CCGTTCGTGA GCCTGTTCTA TGCGGCCGCG TTCCTGCAGC AGGGCGGGAT GCTGACGATC
GTCGGCGCGC TCGAGGCGAG CTACGCGACG GTGCCCGCCG GCGCGCTGTT CTCGGTCGAT
CTGCCGCGCA TCGGCGCGCT GTTGACCGAT CTCGTCGCGC ACGGGCTCGC GCTCGCCGCG
CCCGTGCTGA TCGTGATGTT CGTCACCGAT GCGCTGCTCG GGCTGTTCTC GCGCTTCTGC
CCGCAGGTCA ACGCGTTCTC GCTGTCGCTG ACGGTCAAGA GCATCGTCGC GTTCGCCGTG
TTCCACCTGT ACTTCGTATA CGCGGCGCCG CACGAGCTGA CGGCGCTGCT GCGCGTGCAT
CCTTTCAGCA GCCTGGTGAA GTGA
|
|---|
| Protein sequence | MQAFYRHAGA IAIAYARVAP VFYLLPFLND RTIVNGIVKN TIVFAIILGL WPSFAHPPLQ
GGALAGVALT EAAAGVVLGV ALSLPFWVAT AVGELIDNQR GATISDSIDP ATGVEASALA
PFVSLFYAAA FLQQGGMLTI VGALEASYAT VPAGALFSVD LPRIGALLTD LVAHGLALAA
PVLIVMFVTD ALLGLFSRFC PQVNAFSLSL TVKSIVAFAV FHLYFVYAAP HELTALLRVH
PFSSLVK
|
|---|
| |