| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2136 |
|---|
| Symbol | |
|---|
| ID | 4887183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 2075946 |
|---|
| End bp | 2077343 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640132073 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001063130 |
|---|
| Protein GI | 126442634 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.293887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAACG TCTATTGGCA TCAGGGGATG CTGCTGCAAC CGCAACATTT TCAGTTGGCC
GAACTGCACC AGCAGTTCCG CTTCGAGCCG TGGCTCGCGT GCGGCCCGCC GCATTTCTGG
GGCGTCGGCG CGCTGTCGCT CGCGCAGGCC GCGATCGATC GCCGCGTGGT CGAGATCCGC
TCGGCGCGCC TGCTGTTCGC CGACCGCAGC TACGTCGAAT ATCCGGGCAA CGCGGTCGTC
GCCGCGCGCG CGTTCGATCC CGCGTGGCTC GACGAAGGCC GCGCGCTCGT CGCGCACGTC
GCGCTCAGGC GGCTCGCGCG CGGCGCGAAC AACGTGACGG TCGCGGCCGC GCCCGACGCG
CTGCCCGACG CCGCGACGCG CTACGCGACG CTGCCGTCCG CCGAGGAGGT CGCCGATCTG
CATTCGGACC ATCCGGGCGC GCCGGTGCGC ACGCTCAAGC ACGTGCTGAA AATCGTGTTC
GAGCACGAGC TCGACGCGCT CGCCGCGCAC GAAACGATCC CGATCGCGCG GATCGTGCGC
GACGGCGAGC GCCTGCGGCT CGACGACGAT TTCGCGCCGC CCTGCTACGC GCTGTCGGGC
TCGCGCGCGC TGCTCGAGCG CGTGCGCTGC ATTCGCGACG AGCTCGCGGG CCGCGCGCGG
CAGTTGCAGC AGTACAAGAA TCCGCGCGAG ATGCAACGCG CCGAATTCGA CGCGAGCTAT
GCGGCGTTCC TGCTCGCGCT GCGCTCGCTG AACCGCTTCG GCCCGCTGCT GTTCCATCTC
GCCGAATGCG ACGGGCAGCA TCCATGGACG GTCTACGGCG TGCTGCGCCA ACTCGTCGGC
GAGCTGAGCG TGTTCTCCGA GCGCTTCGAC ATGCTCGGCG AGACGCCCGA TGCGCGCGGC
GGCCTGCCGC CGTACGACCA CCGCGATCTG GGCGGCTGCT TCTCGCGCGC GCACGCGCTG
ATCGGCCACC TGCTCGACGA AATCGCGGTG GGCCCGGACT GCGTCGCGAC GTTCGAGCCC
GACGGCCCGC AGCAGCCCGC GCAACGCTCG GCGCAACTGC CGCCCGACGT GTTCGCGGAT
CGCCACCAGA TCTATCTCGC GATCCGCAGC GCGCACGATC CGGACACGCT CGCGCAACGC
TTCGCGCTCG GCGGCCGGAT CGCGGCGACC GACGAAATGC CGCAGCTCAC CGCGCTCGCG
CTGCCGGGCG TCGAACTCAC CCGCCTGCCC GGCCCGCCGC CGCGGCTGCC GCGCCGCGGC
GACGCGCGCT ACTTCCGGAT CGAGCAGGCC GGCCGCCCGT GGGACGCGAT CCGGCGTGAC
GGCCGCGTGT CGCTGCGCTG GGCCGACGCG CCGGACGACC TGCACGCGGA ACTCGTCGCA
GTGAGGCACA CGCAATGA
|
|---|
| Protein sequence | MDNVYWHQGM LLQPQHFQLA ELHQQFRFEP WLACGPPHFW GVGALSLAQA AIDRRVVEIR
SARLLFADRS YVEYPGNAVV AARAFDPAWL DEGRALVAHV ALRRLARGAN NVTVAAAPDA
LPDAATRYAT LPSAEEVADL HSDHPGAPVR TLKHVLKIVF EHELDALAAH ETIPIARIVR
DGERLRLDDD FAPPCYALSG SRALLERVRC IRDELAGRAR QLQQYKNPRE MQRAEFDASY
AAFLLALRSL NRFGPLLFHL AECDGQHPWT VYGVLRQLVG ELSVFSERFD MLGETPDARG
GLPPYDHRDL GGCFSRAHAL IGHLLDEIAV GPDCVATFEP DGPQQPAQRS AQLPPDVFAD
RHQIYLAIRS AHDPDTLAQR FALGGRIAAT DEMPQLTALA LPGVELTRLP GPPPRLPRRG
DARYFRIEQA GRPWDAIRRD GRVSLRWADA PDDLHAELVA VRHTQ
|
|---|
| |