Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A1993 |
Symbol | |
ID | 4888229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 1930322 |
End bp | 1931131 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640131931 |
Product | YscJ/HrcJ family type III secretion apparatus lipoprotein |
Protein accession | YP_001062988 |
Protein GI | 126442940 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGCTTC ACCGCCTTGT CGTGCGGCTT CTCGGCGTGC TCGCATTGAG CGTTCTGCTT GCCGGTTGTA AGAAGGAGTT GTATACCGGC CTGTCCGAGC AGGACGTCAA CGAGATGATG GTCGCCCTCC TCGAGAACGG CGTCGACGCA TCGAAGGATT CGGCCGATGG AGGCAAGAGC TGGAAGCTGA ACGTCGATGG TGATCAGCTC GTTCACGCGA TGGAGGTACT GCGCACGCGT GGTTTGCCGC GCAGCAAGTT CGACGACCTC GGCAACCTGT TCAAGAAGGA CGGCCTCGTT TCGACGCCGA CGGAGGAACG GATTCGCTTC ATTTACGGCA TGTCGCAGGA GTTGTCGTCG ACACTGTCGA AAATCGACGG CGTGCTGGTT GCACGCGTGC AGATCGTGCT TCCGAATAAC GACCCGCTTG CGCAAACAGC CAAACCGTCA TCGGCGGCCG TATTCATCAA GTATCGGCCG AGCGCCGACA TCACCGCGCT GATTCCGCAG ATCAAGACGC TGGTCATGCA TAGCGTGGAG GGGCTGACCT ACGACCAGGT CAGCGTGACG GCGGTGGCGG CGGATGCCGT CGACCTTGCG CGATCGCGTC CTGCGGCGGT GATCATGCCG CCCTGGCTGG TCGGGCTGTT GGCGTTCGGG GCGGTGTCGA TCGCGGCGGC GGGGCTGTTT GTTGTGTCAA GGCGCCCTTG GACGAGGGCG GGCGCACATG AAGCCGGCAG CGCAGCGCCA TGGCGCAAGC GCGTCGCCGA ACTCGCCGCG CACTTGCGCC GCCGTCAGCG GGCGAACTGA
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Protein sequence | MPLHRLVVRL LGVLALSVLL AGCKKELYTG LSEQDVNEMM VALLENGVDA SKDSADGGKS WKLNVDGDQL VHAMEVLRTR GLPRSKFDDL GNLFKKDGLV STPTEERIRF IYGMSQELSS TLSKIDGVLV ARVQIVLPNN DPLAQTAKPS SAAVFIKYRP SADITALIPQ IKTLVMHSVE GLTYDQVSVT AVAADAVDLA RSRPAAVIMP PWLVGLLAFG AVSIAAAGLF VVSRRPWTRA GAHEAGSAAP WRKRVAELAA HLRRRQRAN
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