Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A1991 |
Symbol | |
ID | 4887908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 1928686 |
End bp | 1929519 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640131929 |
Product | type III secretion system protein HrpB |
Protein accession | YP_001062986 |
Protein GI | 126443282 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | [TIGR02499] type III secretion apparatus protein, HrpE/YscL family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGCCGA TCACGCCGAA CAGCTGCGCT CGACTCGGCT TTTCCGGCGA TGTTGTGCCG CGCGAATGCT TTGGTGAACT GATGACGATC GAGTCCGCCT ATGCGGCGCT CGACGCGGAC CGCGACGCCG TGCTCGCTGC CGCCCGTCAG GAAGCCGACA GAGTGATGGC GGAGGCAGTG GCGAGAACGG AAGAGATGAT CGCCGCCGCA CAGAGCGAAT ACGATGCGGC TGCCGAGCGC GGCTATCGAG ACGGCTACGA CCAAGCGTTC GGCAAGTGGA TGGATCGCCT GGCCGATGTC GCGGACGCGC AGAACCGACT GCAACTGCGA ATGCGCGAGC GGCTGGCCGA CATCGTCGCA TCGGCGGTCG AGCAAATCGT GCGCGCCGAA AGCCGCGAGA CGCTATTCAA GCGCGCGTTG GCATCGGTCG AGCGAATCGT GGACGGCGCG ACATATTTGC GTGTCGTCGT GCACGAGAAC GATCTGGATC AGGCGAGAGC GATCTTCGGC ACGCTCGAAG CGCGCTGGCG CGAGTTCGGC CGCCCGATCG CGATGTCGGT GGTGGCGGAC AAGCGGCTTG CTCCAGGCAG TTGCGTATGC GAGTCCGATT TCGGCGCAAT CGATGCGAGC CTGGATACGC AGCTGCGCGC GATGCGCGGC GCCGTCGCGC GTGCGCTCAA GCGTTCGATT GAAGAAGCCG GCGCGAACGA GTGCGATGCG ACACGCCGTG ACGAATCGAT CGGCATCGAG ACGGATCGGG ACGGCGAGCG TGACGCACGG AACGCCGAGC AGGATGCGGG GGACGCGGGC GCGAGCGCGG GGGGGCGGGC ATGA
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Protein sequence | MGPITPNSCA RLGFSGDVVP RECFGELMTI ESAYAALDAD RDAVLAAARQ EADRVMAEAV ARTEEMIAAA QSEYDAAAER GYRDGYDQAF GKWMDRLADV ADAQNRLQLR MRERLADIVA SAVEQIVRAE SRETLFKRAL ASVERIVDGA TYLRVVVHEN DLDQARAIFG TLEARWREFG RPIAMSVVAD KRLAPGSCVC ESDFGAIDAS LDTQLRAMRG AVARALKRSI EEAGANECDA TRRDESIGIE TDRDGERDAR NAEQDAGDAG ASAGGRA
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