Gene BURPS668_A1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A1991 
Symbol 
ID4887908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp1928686 
End bp1929519 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content66% 
IMG OID640131929 
Producttype III secretion system protein HrpB 
Protein accessionYP_001062986 
Protein GI126443282 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID[TIGR02499] type III secretion apparatus protein, HrpE/YscL family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCCGA TCACGCCGAA CAGCTGCGCT CGACTCGGCT TTTCCGGCGA TGTTGTGCCG 
CGCGAATGCT TTGGTGAACT GATGACGATC GAGTCCGCCT ATGCGGCGCT CGACGCGGAC
CGCGACGCCG TGCTCGCTGC CGCCCGTCAG GAAGCCGACA GAGTGATGGC GGAGGCAGTG
GCGAGAACGG AAGAGATGAT CGCCGCCGCA CAGAGCGAAT ACGATGCGGC TGCCGAGCGC
GGCTATCGAG ACGGCTACGA CCAAGCGTTC GGCAAGTGGA TGGATCGCCT GGCCGATGTC
GCGGACGCGC AGAACCGACT GCAACTGCGA ATGCGCGAGC GGCTGGCCGA CATCGTCGCA
TCGGCGGTCG AGCAAATCGT GCGCGCCGAA AGCCGCGAGA CGCTATTCAA GCGCGCGTTG
GCATCGGTCG AGCGAATCGT GGACGGCGCG ACATATTTGC GTGTCGTCGT GCACGAGAAC
GATCTGGATC AGGCGAGAGC GATCTTCGGC ACGCTCGAAG CGCGCTGGCG CGAGTTCGGC
CGCCCGATCG CGATGTCGGT GGTGGCGGAC AAGCGGCTTG CTCCAGGCAG TTGCGTATGC
GAGTCCGATT TCGGCGCAAT CGATGCGAGC CTGGATACGC AGCTGCGCGC GATGCGCGGC
GCCGTCGCGC GTGCGCTCAA GCGTTCGATT GAAGAAGCCG GCGCGAACGA GTGCGATGCG
ACACGCCGTG ACGAATCGAT CGGCATCGAG ACGGATCGGG ACGGCGAGCG TGACGCACGG
AACGCCGAGC AGGATGCGGG GGACGCGGGC GCGAGCGCGG GGGGGCGGGC ATGA
 
Protein sequence
MGPITPNSCA RLGFSGDVVP RECFGELMTI ESAYAALDAD RDAVLAAARQ EADRVMAEAV 
ARTEEMIAAA QSEYDAAAER GYRDGYDQAF GKWMDRLADV ADAQNRLQLR MRERLADIVA
SAVEQIVRAE SRETLFKRAL ASVERIVDGA TYLRVVVHEN DLDQARAIFG TLEARWREFG
RPIAMSVVAD KRLAPGSCVC ESDFGAIDAS LDTQLRAMRG AVARALKRSI EEAGANECDA
TRRDESIGIE TDRDGERDAR NAEQDAGDAG ASAGGRA