| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1954 |
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| Symbol | |
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| ID | 4886398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | - |
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| Start bp | 1893552 |
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| End bp | 1894796 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640131892 |
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| Product | sarcosine oxidase beta subunit |
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| Protein accession | YP_001062949 |
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| Protein GI | 126443706 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCT ACTCGATATT CAGCCTGTTT CGCAACGGCC TGTCGTATCA CGAGAACTGG
GAAAAGCAGT GGAAGAGCCC GGAGCCGAAG CGCGAGTACG ACGTCGTGAT CGTCGGCGGC
GGCGGGCATG GGCTCGCCAC CGCGTACTAC CTCGCGAAGG AGCATGGCGT GACGAACGTC
GCGATTCTCG AGAAGGGCTG GATCGGCGGC GGCAACACCG CGCGCAACAC GACGATCGTC
CGCTCGAACT ACCTGTGGGA CGAATCCGCC GGGCTCTACG AGAAGGCGAT GAAGCTGTGG
GAAGGGCTCG CGCAGGACTT GAACTACAAC GTGATGTTCA GCCAGCGTGG CGTGATGAAC
CTCGCGCATA CGCTGCAGGA CGTGCGCGAC ACCGAGCGCC GCGTGAACGC GAACCGGCTG
AACGGCGTCG ACGCCGAGTT CCTCACGCCC GCGCAGATCA AGGAGATCGA GCCGACGATC
AACCTGAACA GCCGCTACCC GGTGCTTGGC GCGTCGATCC AGCGGCGCGG CGGCGTGGCG
CGGCACGACG CGGTGGCCTG GGGCTTCGCG CGCGGCGCGG ACCGCGCGGG CGTCGACATC
ATCCAGAACT GCCAGGTGAC GGGAATCCGC CGCGAGGGCG GGGCGGTGGT CGGCGTCGAT
ACGGTCAAGG GCTTCATCAA GGCGAAGAAG GTCGCGGTGG TCGCGGCGGG CAACACGACG
ACGCTCGCCG ACATGGCTGG CGTGCGGCTG CCGCTCGAAA GCCATCCGCT GCAGGCGCTC
GTGTCCGAGC CGATCAAGCC GGTCGTCAAC ACGGTCGTGA TGTCGAACGC GGTGCATGCG
TACATCAGCC AGTCCGACAA GGGCGACCTC GTGATCGGCG CGGGTATCGA CCAATACACG
GGCTTCGGCC AGCGCGGCAG CTTCCAGATC ATCGAAGGCA CGCTGGAGGC GATCGTCGAG
ATGTTCCCGG TGTTCTCGCG CGTGCGGATG AACCGCCAGT GGGGCGGCAT CGTCGACGTG
TCGCCGGACG CGTGCCCGAT CATCAGCAAG ACCGACGTGA AGGGCCTGTA TTTCAACTGC
GGCTGGGGCA CGGGCGGCTT CAAGGCGACG CCGGGCTCGG GCTGGGTGTT CGCGCATACG
ATCGCGCGCG ACGAGCCGCA CGCGCTGAAC GCGCCGTTCG CGCTCGACCG GTTCTACACC
GGCCACCTGA TCGACGAGCA CGGCGCGGCC GCCGTCGCGC ATTGA
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| Protein sequence | MSRYSIFSLF RNGLSYHENW EKQWKSPEPK REYDVVIVGG GGHGLATAYY LAKEHGVTNV
AILEKGWIGG GNTARNTTIV RSNYLWDESA GLYEKAMKLW EGLAQDLNYN VMFSQRGVMN
LAHTLQDVRD TERRVNANRL NGVDAEFLTP AQIKEIEPTI NLNSRYPVLG ASIQRRGGVA
RHDAVAWGFA RGADRAGVDI IQNCQVTGIR REGGAVVGVD TVKGFIKAKK VAVVAAGNTT
TLADMAGVRL PLESHPLQAL VSEPIKPVVN TVVMSNAVHA YISQSDKGDL VIGAGIDQYT
GFGQRGSFQI IEGTLEAIVE MFPVFSRVRM NRQWGGIVDV SPDACPIISK TDVKGLYFNC
GWGTGGFKAT PGSGWVFAHT IARDEPHALN APFALDRFYT GHLIDEHGAA AVAH
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