| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1844 |
|---|
| Symbol | pcaQ |
|---|
| ID | 4886187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 1800181 |
|---|
| End bp | 1801185 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640131782 |
|---|
| Product | pca operon transcription factor PcaQ |
|---|
| Protein accession | YP_001062839 |
|---|
| Protein GI | 126442710 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR02424] pca operon transcription factor PcaQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.282267 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAACC GGATCGCCGA CGGCCGGGTC AAGTTCCGGC ACCTGCAGTG CTTTCTCGCC
GTTGCGCAGT TCGGCAGCGT GCAGAAGGCC GCGCACAGCC TGTCGATCAC GCAGCCCGCC
GTGTCGAAGA CGATCGCCGA GCTCGAATCG ATCCTCGGCG TGCGGCTGTT CGAGCGCGGC
CGGCAGGGCG CGCGGCCCAC GCGCGAGGGC CAGCTTTTCA TGCCGCACGC GAGCGCGTGC
GTGCTCGCGC TGCGGCAGGG CGTGGGGCTG CTCGCGCGCG AGGGCGGCGG CGCGGCGGCC
ACTCTCGAGA TCGGCATGCT GCCGACCGTC GCCGCGTCGC TCGCGCCCGC CGTGCTGAAG
ACGCTCGCGG CCGAATGGCC GCGCGCGGTC GTGCGGATCA CGACCGTCGC GAACGCCGAG
CTGCTCGAGC GGCTGAAGGC GGGGGCAATC GAATGCGCGA TCGGGCGGCT GTCGGAGCCC
GAGCGGATGG TGGGGCTGTC GTTCGAGCAT TTGTACAACG AGCCGCTCGT CGCGGTCGTG
CGCGCGGGCC ATCCGCTTGC GGCGAGCGCT TCGCCCGCCG CGCAGCTCGC GCGCTATCCG
GTCGTGCTGC CGCCTTACGG CACGATGATC CGGCAAGCGG CCGAGCAATT GTTGAGCGCG
TGCGGCGCGC CGCCGCTCGA ATCGTTCGTC GAGGTGCTGT CGGTATCGGT CGCGCGCGCG
CTCGCGCTCG AGAACGACGC GGTGTGGTTC GTGCCGCGCT ACGCGGCCGA ATTCGATCTC
GCGGCCGGCA CGCTCACGCG GCTCGCGCTG CCCGTCGACG GCGCGGACGA GCCGGTCGGG
CTGATCCTGC GCACCGACGC GCAGCCGTCA CCCGTCGCGC GCGCGCTGAT CGACGCGGTG
CGCGCGATTG CGCGGCGGCG GCTTGCCGGA GCGGGCACGA CGAGCGGGCG CGCGCGCGGC
GCGCGAGGCG CGACGGGCAA GGGGCGCGGT CGGCGGGACG CGTGA
|
|---|
| Protein sequence | MHNRIADGRV KFRHLQCFLA VAQFGSVQKA AHSLSITQPA VSKTIAELES ILGVRLFERG
RQGARPTREG QLFMPHASAC VLALRQGVGL LAREGGGAAA TLEIGMLPTV AASLAPAVLK
TLAAEWPRAV VRITTVANAE LLERLKAGAI ECAIGRLSEP ERMVGLSFEH LYNEPLVAVV
RAGHPLAASA SPAAQLARYP VVLPPYGTMI RQAAEQLLSA CGAPPLESFV EVLSVSVARA
LALENDAVWF VPRYAAEFDL AAGTLTRLAL PVDGADEPVG LILRTDAQPS PVARALIDAV
RAIARRRLAG AGTTSGRARG ARGATGKGRG RRDA
|
|---|
| |