Gene BURPS668_A1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A1803 
Symbol 
ID4885745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp1762274 
End bp1762744 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content66% 
IMG OID640131740 
ProductECF subfamily RNA polymerase sigma factor 
Protein accessionYP_001062797 
Protein GI126443279 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTACCCC GTCTGCTCGC CTTCGCTCGC CGCCTCTGCG GCGATACGCA CGACGCCGAC 
GATCTGGTGC AGCGTGCGTG CCTGAGGGCG CTCGAGCGCC CTCATCAATT GCAGCGGGAT
ACGTCGCCGC TCAATTGGAT GATGGCGATC GTGCATTCGA GCTGGATGAG CGAATTGCGC
GCGAGGCATG TGCGGCATCG ATTGCAAACC GACTGGAACG ACGACGTCAT CGACGCGCTG
CCCGGGCCGA CGGCCGCCGA TCCGCAAATC CACGCGATGA ATGCGCAGAT CATTCGCGCC
GTCGAATTGC TGCCTGAAAC ACTGCGCGCG GCGATGCTGC TGATCGCCGT CGAAGGGCTG
AGCTACCAGG AAGCGGCCGG CGTGCTCGAC GTGCCGATCG GAACCGTGAT GAGCCGCCTG
TGGCGCGCGC GCCAATCCAT CGGCGCGCAG TTCGGCGCGC GCGAGCGCTA G
 
Protein sequence
MLPRLLAFAR RLCGDTHDAD DLVQRACLRA LERPHQLQRD TSPLNWMMAI VHSSWMSELR 
ARHVRHRLQT DWNDDVIDAL PGPTAADPQI HAMNAQIIRA VELLPETLRA AMLLIAVEGL
SYQEAAGVLD VPIGTVMSRL WRARQSIGAQ FGARER