| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1773 |
|---|
| Symbol | |
|---|
| ID | 4887979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 1720131 |
|---|
| End bp | 1721138 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640131712 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001062769 |
|---|
| Protein GI | 126444710 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.790633 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGAT TTCAGGAAAT GCAGGTTTTC GTGCGGATCG CCGAGCGGCA GAGCTTCAGC
CGGGCCTCGG ACGATCTGCG GATTCCGCGC GCGACCGTGA CCAACCTGAT GAAGCGCATG
GAGGCGCGGC TCGGCGCGCG GCTGCTCGAA CGGACGACGC GCACCGTGCG CCTCACGCAG
GACGGCGAAG CCTACTACCG GCGCTGCGTG CGGCTGATCG CCGATCTGGA GGAGGCCGAG
GGCGCGTTTC GCGCCGCGGC GCCGCGGGGG CTGCTGCGCG TGAACCTGCA GGGCACGCTC
GCGCGCTATT TCGTCGTGCC CGCGCTGCCG GATTTTCTCG CGCGCTATCC GGGGATCCGG
CTGCACATCG GCGAGGACGA CCGCTTCGTC GATCTGGTGC GCGAGGGCGT CGATTGCGTG
CTGCGCTCGG GCAACCTGCA GGATTCGTCG ATGGTCGGGC GGCGGGTCGC GCAGCTCGAG
CAGGTGACGG TCGCGAGCCC CGGCTATCTC GCGCGGCACG GCGAGCCGGC CGAGCTCGCC
GCGCTGGCCG CGCATCGCGC GGTCGACTAC GTGTCGAGCG CGACGGGCAA GCCGATGCCG
CTCGAATTCA CCGTCGACGG GCGCGTGACC GAGGTGCGGC TCGACGCGGC GATTTCCGTC
GCGGGCGTCG AGCTCTACAC GGGCGCGGCC GTCGCGGGGC TCGGCATCGT GCAGGTGCCG
CGCTACCGGA TCGCCGACGA ACTGGCCGAC GGGCGCCTGA GGATCGTGCT CGGCGCGTAT
CCGCCGCCGC CGATGCCCGT CAGCGTGCTG TATCCGCACA GCCGGCAGTT GTCGTCGCGC
GTGCGGGCGT TCGCGCAGTG GCTGCGGGAG CGGTTCGACG CGGCGCAGGC GGGGGCGGGC
GACGGCGCGT GCGGCGCGCC GGGCTCTTCG GGTTCCGCCG CGCGCGCGCC GTCGCCGGCT
CGGTCGGAAC CGGCGAAAGC GTTGCTATCG CGGCGGCCGC GTCGCTAG
|
|---|
| Protein sequence | MDRFQEMQVF VRIAERQSFS RASDDLRIPR ATVTNLMKRM EARLGARLLE RTTRTVRLTQ
DGEAYYRRCV RLIADLEEAE GAFRAAAPRG LLRVNLQGTL ARYFVVPALP DFLARYPGIR
LHIGEDDRFV DLVREGVDCV LRSGNLQDSS MVGRRVAQLE QVTVASPGYL ARHGEPAELA
ALAAHRAVDY VSSATGKPMP LEFTVDGRVT EVRLDAAISV AGVELYTGAA VAGLGIVQVP
RYRIADELAD GRLRIVLGAY PPPPMPVSVL YPHSRQLSSR VRAFAQWLRE RFDAAQAGAG
DGACGAPGSS GSAARAPSPA RSEPAKALLS RRPRR
|
|---|
| |