Gene BURPS668_A1652 details

Gene Information

• Locus tag: BURPS668_A1652
• ID: 4885977
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009075
• Strand: +
• Start bp: 1596469
• End bp: 1597173
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640131591
• Product: ATP-dependent transcription regulator LuxR
• Protein accession: YP_001062648
• Protein GI: 126444655
• COG category: [K] Transcription
• COG ID: [COG2771] DNA-binding HTH domain-containing proteins

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 0.643432
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACGACT TTCTTCAATT TTGGCTAAAC GAATTTTCAC GCAGTGAGAA CCCACAGCAC 
GTCATTTCCG TCTTGACCCG CGCGGCCGCG ACGCTCGGCT ACGAATACGC CGCCTACGGC 
ATGCGCCGCC CCTTTCCGAT CAGCAATCCG CCGATCCTCA TGGTGTCCAA CTATCCCGCC 
CGATGGCAGG AACGCTATAT CGAAGCGCGA TTCGCGAACA TCGACGGCGC GGTGAAGGCC 
GCGCTCGGCA GCGACCGGCC CGTGACCTGG AGCGCGCCCG CCAACGCATC GAAAAGCGCA 
TTCTGGGCGG AGGCGCTGTC GTTCGGCATC GCCCACGGCT GGTCGTCCGC GTCGCGGGGC 
GCGGACGGCG CGATCGGCGT GCTGACGCTG TCGAGAACGC AGGACCCGAT CGACACCGCG 
GAGAAGTTTC GCAACGAGAG CATCGTGCAC TGGCTCGCCA ATGTCGCTCA TGCGTCGATG 
GCGCCGTTCC TGCCCGCCGC CGACGAGTTC GATCCGGACC TCACGCGCCG CGAGACCGAT 
GTGCTGAAAT GGACGGCCGA CGGAAAGACA GCGTACGAAA TCGCGCTGAT TCTCAGCATC 
TCGGAGAGCA CCGTCAATTT TCACGTGAAG AATATCGTCT CCAAGCTGGG CTCCACGAAC 
AAGATACAGG CCGTGGCCAA GGCCGCGCTG ATGGGGATGC TGTGA 

 

Protein sequence

MHDFLQFWLN EFSRSENPQH VISVLTRAAA TLGYEYAAYG MRRPFPISNP PILMVSNYPA 
RWQERYIEAR FANIDGAVKA ALGSDRPVTW SAPANASKSA FWAEALSFGI AHGWSSASRG 
ADGAIGVLTL SRTQDPIDTA EKFRNESIVH WLANVAHASM APFLPAADEF DPDLTRRETD 
VLKWTADGKT AYEIALILSI SESTVNFHVK NIVSKLGSTN KIQAVAKAAL MGML