| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1644 |
|---|
| Symbol | |
|---|
| ID | 4887206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 1572895 |
|---|
| End bp | 1574487 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640131583 |
|---|
| Product | metallo-beta-lactamase family protein |
|---|
| Protein accession | YP_001062640 |
|---|
| Protein GI | 126445483 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGAGCC AATATTTCCT CAAGAAGAAC GTCAAGATCG AGCCGCTGGT CAACCGCTGG
CACGCCAATC CATGGCTCGT GTATCCGCCG ACGGCGGCTT ATCTGATGCG GCATCACCTC
GAGATCATGA CGTCGTTCGT CAAGCACGCG GCGCTGCACG AGAAGGCGGC CGCCAGCCGG
AAGATTCGCG GCGGCCCGTT CGTGCAGGGG CTCAACGCGC AGGACGTGCC GGCGATGGAG
GCGCTGATCG AGACCACGCG GCGCGACGGC GCGCATCTGT TCGGGCTCGC CGACGATCTC
GACGCGCTCG CCGCGACGCT CGGCGCCGCC GACGGCCACA GCCTCGTTCC GTTCTACGAG
CAGGTGCCGC CGCGCTTGCG CGGGATGGTG GAGCTCGCGT ATCAGGCGGG CAACCGCGCG
TACGCGCGGC TGATGGAGGG GCTGTACTAC GACGCATACG ATACGAGCGC GCTGCAGTCG
TTCGCGCTCG CGCCGCTGTG GGACGACAGC CGGCCGTTCT GCCTCAGCAC GCCGCGGCTC
GACACGAGCG ACGACGTGCT GCTCGACATC CCGTTCGCGG ACCCGCTCGC GGTCGCGCTG
ACGGCGTCGC GCCGCAACGG GCTCACGCCC GCGCAATTCG AGGCGCTGCT CGATCGCCGC
TCGAAGGGCA CGCGCGCCGA CGCGGTGGCC GCGCTGTTCT CGGACACCGC GCCGCCGCGC
GGCGCGGCCG ACGCGCACGA GCCGCGCGTG CGCTACTTCG GCCACGCCTG CGTGCTCGTG
CAGACCGGCT CGGAGAACCT GCTGTTCGAT CCGCTGATCA GCTACCCGTT TCCCGGACAA
TCGCCGCGCT TCACGTTCGA CGATTTGCCC GACGTGATCG ACTACGTCGT GATCACCCAT
TCGCATCACG ATCACTTCGT GCTCGAGACG CTGCTGCAGA TTCGCGATCG CGTGAAGACG
ATCGTGGTGC CGCAGAACAC GCACGGACAA CTGATGGACC CGTCGCTCAA GCATACCGCG
CACGCACTCG GGTTCGAGAA CGTCATCATG ATGAGCGAGT TCGACACGCT CGAGCTCGGC
GGCGGCAAGC TGCATGCGGT GCCGTTCCTC GGCGAGCACG GCGACCTCGA CATCCGCAGC
AAGCTCGGCT TTCTCGTCGA GGCGGGCGAT CGGCGCGTGC TGATGGTCGC GGACAGCAAC
AACCTCGACG ACAGGCTCTA CGAGCACGTT CGCCGCCGCT ACGGCAAGGT CGATCTGCTG
TTCATCGGCA TGGAGTGCGA GGGCGCGCCG GTGTCGTGGC TGTACGGGCC GATGCTCGAC
ACGAAGCTCG CGCGTTCGAT GGACGACAGC CGGCGGCTCA ACGGCTCCGG CTCCAGCGCG
GGCTTGCGGC TGGCCGAGAT CGTCGGCGCG GATCGCGTGT TCATCTATGC GATGGCGCAG
GAGCCGTGGC TCACGTTCAT CAGCAGCCTC GAATACGACG AGAGCTCGTT CGCGATGCGC
GAGGCGAGAA AGATGATCGC CGCGTGCGGG CAGGCGGGCA TCGACGCATG CCTGCTCAAC
GGCTGCGTCG ACATTGCGCT GGGCGCGCGG TGA
|
|---|
| Protein sequence | MTSQYFLKKN VKIEPLVNRW HANPWLVYPP TAAYLMRHHL EIMTSFVKHA ALHEKAAASR
KIRGGPFVQG LNAQDVPAME ALIETTRRDG AHLFGLADDL DALAATLGAA DGHSLVPFYE
QVPPRLRGMV ELAYQAGNRA YARLMEGLYY DAYDTSALQS FALAPLWDDS RPFCLSTPRL
DTSDDVLLDI PFADPLAVAL TASRRNGLTP AQFEALLDRR SKGTRADAVA ALFSDTAPPR
GAADAHEPRV RYFGHACVLV QTGSENLLFD PLISYPFPGQ SPRFTFDDLP DVIDYVVITH
SHHDHFVLET LLQIRDRVKT IVVPQNTHGQ LMDPSLKHTA HALGFENVIM MSEFDTLELG
GGKLHAVPFL GEHGDLDIRS KLGFLVEAGD RRVLMVADSN NLDDRLYEHV RRRYGKVDLL
FIGMECEGAP VSWLYGPMLD TKLARSMDDS RRLNGSGSSA GLRLAEIVGA DRVFIYAMAQ
EPWLTFISSL EYDESSFAMR EARKMIAACG QAGIDACLLN GCVDIALGAR
|
|---|
| |