Gene BURPS668_A1617 details

Gene Information

• Locus tag: BURPS668_A1617
• ID: 4887386
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009075
• Strand: -
• Start bp: 1546154
• End bp: 1548160
• Gene Length: 2007 bp
• Protein Length: 668 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640131556
• Product: hydrogenase 4 subunit B
• Protein accession: YP_001062613
• Protein GI: 126444905
• COG category: [C] Energy production and conversion; [P] Inorganic ion transport and metabolism
• COG ID: [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACAGG GGCTGCTTCT CCGATGCGTG CTGTTCGTCG CGCTCGCATG GCTCGCGCTC 
GGCTGCGCCG GACTCGCGAA CCTGCGCCGC ACCGGTGTGA TCGCACACGG CCTCTTCCCG 
CTCGGCGCGC TGGCCGGGCT CGTGCTCGCG GCGCTCGGCC TGGCCGGCGT GTTCGCCGGG 
CCGTCGAGCG CCGTGCTGCC GCTCGGGCTG CCCGACCTGC CGTTCCATCT GCGTGTCGAT 
CCGCTGTCCG CATACTTCCT GTTCGTGCTC GGCGTGGTGA CGGCGGGCGT CGGCGCGTTC 
TCGTCCGGCT ACTTCCGCAA GGGCGAGGGC ACGGCGCCCG GCCTCATCTG CTTCGAGTAC 
CACGTGTGCG TCGCGAGCAT GGTGCTGCTG CTCGTCGCGG ACGATGCGTA CTGCTTCATG 
GTCGCGTGGG AGACGCTGAC GCTGTCGGCG ACCTTCCTCG TGATGACGAA CCACCGGATC 
GCCGAGATCC GCCGCGCCGC ATTCGTGTAT TTCCTGATCT CGCACGTCGG CGCGCTCGCG 
CTGCTGCTGT GCTTCGGCCT GCTGCAGGCG GGCACGGGCG ACTACACGTT CGCGAACATG 
CGCATCCAGC ATCTCGACGG GCTCGCCGCA TCGGCCGCGT TCGTGCTCGC GCTCGTCGGC 
TTCGGCGCGA AGGCCGGCAT CTTTCCGCTG CACGTCTGGC TGCCGGACGC GCATCCGGCT 
GCGCCGTCGC CGGTATCCGC GCTGCTGAGC GGCTTCGTGC TGAAGGTCGG CCTGTATGGA 
ATATTGCGCA CGGTGCTCGA TCTGCTGCAC GTGCAGGTGG CGTGGTGGGG CGTGCTCATG 
CTCGCGCTCG GCCTGTTCGG CGCGTTGCTC GGCGTCGTGT TCAGCACGAT CCAGACCGAC 
ATGAAGCGGC TGCTCGCCTA TTCGTCGATC GACAACGTCG GCCTGATGTG CGTGAGCCTC 
GGGCTCACGA TCCTGTTCCT CGGCTACCGG CTGCCCTCGC TCGCCGCGCT GTCGCTGACG 
GCGCTGCTGT ATCAGATCGT CGCGCACGCG TGCTTCAAGA GCCTGCTGTT CCTCGGCACG 
GGCGCCGTGC TGCACGCGAC GGGCGAGCGC AATCTCGGCC GGCTCGGCGG CTTGATCCGC 
TTCATGCCGT GGACCGCGTG GGCGATGCTC GTCGGCGTCG CCGCGAGCGC CGGGCTGCCG 
CCGTCGAGCG GCTTCGTGTC CGAATGGCTG CTCGTGCAGA GCTTCCTGTT CACGCCGGGG 
CTGCCGGATT CGGTGCTCGG GATGACGGTG CCGCTCGTCG CGGCGCTCGT CGCGCTGACG 
GCGGCGCTCG CCGGCTACGC GATGGTCAAG TTCTTCGGCA TCGTGTTCCT CGGCCGGCCG 
CGCGAGGCCA AGCTCGAGCG CGCGCGCGAC GCGAGCCCGT GGGAGCGGAT CGCGTTCGGC 
TGGTTCGCGG CCGCGAGCGT GCTGCTCGGC CTCGCGCCCG TTCAGTACGT GAAGGTGCTC 
GATGCGCTCA CGCGCGCGCT CGTCGGCGCG GGCATCGCGG GCACGAATCA CGGGTGGCTG 
CTGTTCGCGC CCGTGTCCAC CGCGCGCGCG AGCTACATGC CGGCGCTCTT CATGCTGTTC 
TTCGTCGCGT GCTGCGCGCT CGCGTGGCTG CTCGTGCGGC GCTTCTATCA CGGCAGGCTG 
CGGCGCGCGG CGCCGTGGTC GTGCGGCAAT CCGTTCGTGA CCGCGCGCAT GCAGGACACG 
GCCGAAGGCT TCGGCCAGCC GATCCGCGAG ATCTTCACGC CGTTCTTCCG GATCGAGCGG 
CAACTGCCGT CGCCGTTCGA TCGGCAGCCG GCCTACCGGA TGAGCGTCGC GGACCGCACG 
TGGCACCTGC TGTACGAGCC GATCGCCGCG CTCGCAAACC GCGTCGCCGC GCTCGTCGGG 
CGGTTGCAGA CGGGCCGCAT CGCGATCTAT CTGACGTACA GCTTCATCGT GCTGATCGTC 
CTTCTGACGG TGGTGAGACG ATGGTGA 

 

Protein sequence

MEQGLLLRCV LFVALAWLAL GCAGLANLRR TGVIAHGLFP LGALAGLVLA ALGLAGVFAG 
PSSAVLPLGL PDLPFHLRVD PLSAYFLFVL GVVTAGVGAF SSGYFRKGEG TAPGLICFEY 
HVCVASMVLL LVADDAYCFM VAWETLTLSA TFLVMTNHRI AEIRRAAFVY FLISHVGALA 
LLLCFGLLQA GTGDYTFANM RIQHLDGLAA SAAFVLALVG FGAKAGIFPL HVWLPDAHPA 
APSPVSALLS GFVLKVGLYG ILRTVLDLLH VQVAWWGVLM LALGLFGALL GVVFSTIQTD 
MKRLLAYSSI DNVGLMCVSL GLTILFLGYR LPSLAALSLT ALLYQIVAHA CFKSLLFLGT 
GAVLHATGER NLGRLGGLIR FMPWTAWAML VGVAASAGLP PSSGFVSEWL LVQSFLFTPG 
LPDSVLGMTV PLVAALVALT AALAGYAMVK FFGIVFLGRP REAKLERARD ASPWERIAFG 
WFAAASVLLG LAPVQYVKVL DALTRALVGA GIAGTNHGWL LFAPVSTARA SYMPALFMLF 
FVACCALAWL LVRRFYHGRL RRAAPWSCGN PFVTARMQDT AEGFGQPIRE IFTPFFRIER 
QLPSPFDRQP AYRMSVADRT WHLLYEPIAA LANRVAALVG RLQTGRIAIY LTYSFIVLIV 
LLTVVRRW