Gene BURPS668_A1574 details

Gene Information

• Locus tag: BURPS668_A1574
• Symbol: ftsH
• ID: 4887200
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009075
• Strand: -
• Start bp: 1505993
• End bp: 1507993
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640131513
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_001062570
• Protein GI: 126442831
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.580758
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAGCG AAACCGGATA CATGGGATTC GTCGTCGTGC TCGTGTTCAT GGTGCTGCTC 
GCGCTGCAGC TCGCCACGCT CAGCGCGCCG GCCACGCAGA TCGCGTACAG CGACTTTCGC 
AAGCTCGCCG CGGCCGCGCA GCTCGACGAT CTCGAAGTCA GCCCGACGCG CATCACGGGC 
GTGCTGCGCA GTGCGTCCGC GGCGGCGGCG CTGCCCGCCT CCGACGCGGA GGCGATCAAG 
CGCGCGGGCA CGCCGTGGCG CTTCTCGACA AAGCGCGTGA CCGACGAGCG CCTGATCGAC 
ACGCTCGCCG CGACGGGCAC CCGCTATCGC GGCGCCGACG ACGACACGTG GATCGGCACG 
CTCGCATCGT GGATCGTGCC GATCGCGGTG TTCGCGCTCG TCTGGAACCT GATGCTGCGG 
CGCCCGCGCG GCGGCCTGCA GGACTGGTCG GGCGTCGGCA AGAGCAAGCC GCGCGTCTAT 
GTGGAGGCGA AGACCGGCAT CGATTTCGAC GACATCGCGG GCATCGACGA GGCGAAGGCC 
GAGCTCCAGC AGATCGTCGC GTTTCTGCGC GCGCCCGCGC GCTACCAGCG GCTCGGCGGC 
AAGATCCCGA AGGGCGTGCT GATCGTCGGC GCGCCCGGCA CCGGCAAGAC GCTGCTCGCG 
AAGGCGGTGG CGGGCGAGGC GGGCGTGCCG TTCTTCTCGA CGAGCGGCTC GTCGTTCGTC 
GAGATGTTCG TCGGCGTCGG CGCGGCGCGC GTACGCGATC TGTTCGAGCA GGCGCAGCAA 
AAGGCGCCGT GCATCATCTT CATCGACGAG CTCGACGCGC TCGGCAAGGT GCGCGGCGCG 
GGGCTCGCGT CGGGCAACGA CGAGCGCGAG CAGACCCTGA ACCAGTTGCT CGTGGAGATG 
GACGGCTTCC AGGCGAACTC CGGCGTGATC CTCATGGCGG CGACCAATCG TCCGGAGATT 
CTCGATCCCG CGCTGCTGCG CCCGGGCCGC TTCGACCGCC ACATCGCGAT CGACCGGCCG 
GACTTGACGG GGCGCCGGCA GATCCTGTCG GTCCACGTGA AGCACGTGAA GCTCGGCCCG 
GACGTCGATC TCGGCGAGCT CGCGTCGCGC ACGCCCGGCT TCGTCGGCGC GGATCTCGCG 
AACATCGTCA ACGAGGCGGC GCTGCACGCG GCCGAGCTCG ACAAGCCCGC GATCGACATG 
TCCGATTTCG ACGAGGCGAT CGACCGCGCG ATGACCGGCA TGGAACGCAA GAGCCGCGTG 
ATGAGCGAGC GCGAGAAGAT CACGATCGCG CATCACGAGG CGGGGCACGC GCTGATCGCG 
CAGACGCGCG CGCACAGCGA TCCGGTGAAG AAGGTGTCGA TCATTCCGCG CGGCATCGCG 
GCGCTCGGCT ACACGCAGCA GGTGCCGACC GAGGATCGCT ACGTGCTGCG CAAGAGCGAG 
CTGCTCGACC GGCTCGACGT GCTGCTCGGC GGGCGCGTCG CCGAGGAGAT CGTGTTCGGC 
GACGTGTCGA CGGGCGCGGA GAACGATCTC GAGCGCGCGA CCGAAATGGC GCGGCACATG 
GTCGCCCGCT ACGGGATGAG CGAGCGGATC GGCCTCGCGA CGTTCGGCGA CGCGGACACC 
CAGGGGCTGT CGCCCCTCGT CTGGCGGCGC GGCGGCGAGC GCTGCAGCGA GAGCACCGCG 
ACGCGGATCG ACGACGAGAT CCAGCGGCTC CTCGCCGAGG CGCACGATCG CGTGTCGCGT 
ACGCTGAAGG AGCGGCGCGG CGCGCTCGAA CGGATCGCCG GGTATCTGCT CGAGCACGAG 
GTGGTCGATC ACGACAAGCT CGTGAGGCTC GTCAACGACG AGCCGACGCC CGAGCCCGGC 
GCGCGCGATC CGGGCGGGGA CGCGGCGAAG CGAAGCGGCA TCGGCGCCGC GCCGGCGAAG 
CCGCCGGCGG AAGTCGGGAG CGCCGAGCTT CGCGATCCGG CTCGAAAGGC CGACAACGCG 
GACCACTCCG TGCCGCAGTG A 

 

Protein sequence

MKSETGYMGF VVVLVFMVLL ALQLATLSAP ATQIAYSDFR KLAAAAQLDD LEVSPTRITG 
VLRSASAAAA LPASDAEAIK RAGTPWRFST KRVTDERLID TLAATGTRYR GADDDTWIGT 
LASWIVPIAV FALVWNLMLR RPRGGLQDWS GVGKSKPRVY VEAKTGIDFD DIAGIDEAKA 
ELQQIVAFLR APARYQRLGG KIPKGVLIVG APGTGKTLLA KAVAGEAGVP FFSTSGSSFV 
EMFVGVGAAR VRDLFEQAQQ KAPCIIFIDE LDALGKVRGA GLASGNDERE QTLNQLLVEM 
DGFQANSGVI LMAATNRPEI LDPALLRPGR FDRHIAIDRP DLTGRRQILS VHVKHVKLGP 
DVDLGELASR TPGFVGADLA NIVNEAALHA AELDKPAIDM SDFDEAIDRA MTGMERKSRV 
MSEREKITIA HHEAGHALIA QTRAHSDPVK KVSIIPRGIA ALGYTQQVPT EDRYVLRKSE 
LLDRLDVLLG GRVAEEIVFG DVSTGAENDL ERATEMARHM VARYGMSERI GLATFGDADT 
QGLSPLVWRR GGERCSESTA TRIDDEIQRL LAEAHDRVSR TLKERRGALE RIAGYLLEHE 
VVDHDKLVRL VNDEPTPEPG ARDPGGDAAK RSGIGAAPAK PPAEVGSAEL RDPARKADNA 
DHSVPQ