Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A1441 |
Symbol | |
ID | 4888428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 1347568 |
End bp | 1348281 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640131380 |
Product | His/Glu/Gln/Arg/opine ABC transporter permease |
Protein accession | YP_001062438 |
Protein GI | 126444820 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTCAGA TCATCGGCCA ATATTGGCAG AACTACCTGT TCAGCGACGG CTACCGGTTG AGCGGCCTCG CGATCACGCT GTGGCTGCTC GTCGTGTCGC TCGGGCTCGG CTTCGGCCTC GCGGTGCCGC TCGCGATCGC GCGCGCGTCG CGCAACCGCG CGGTGTCGGG CGCGGTGTGG CTCTACACGT ACGTGTTCCG CGGCACGCCG CTCTACGTGC AACTGCTGCT CTGCTACACG GGCATCTACA GCCTGAGCGT CGTGCACGAT CACGCGTGGC TCGACAGCTT CTTTCGCAGC GCGATGAACT GCACGCTGCT CGCGTTCACG CTGAACGAGT GCGCGTACGC GACCGAGATC TTCGCGGGCG CGATCAAGTC GACGGCGCCG GGCGAGATCG AGGCGGGGCT CGCGTACGGC ATGTCGCGCT TCAAGCTGTA CACGCGGGTG ATCCTGCCGT CGGCGCTGCG CCGCGCGCTG CCGAGCTACA GCAACGAAGT GATCCTGATG CTGCACGCGA CGACGCTCGC GTTCACGGCG ACGGTGCCCG ACATCCTGAA GGTCACGCGC GACGTCAATT CGGCAACCTA CGCATCGTTT CAGGCCTACG GGATCGCGGC CGCGCTGTAC GCGGTCGTCG TGTTCGCGCT GATCTGGCTG TTCCGCCGGA TGGAGGCGCG CTGGCTCGCG TACCTGAGGC CGCAGGGGCA TTGA
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Protein sequence | MIQIIGQYWQ NYLFSDGYRL SGLAITLWLL VVSLGLGFGL AVPLAIARAS RNRAVSGAVW LYTYVFRGTP LYVQLLLCYT GIYSLSVVHD HAWLDSFFRS AMNCTLLAFT LNECAYATEI FAGAIKSTAP GEIEAGLAYG MSRFKLYTRV ILPSALRRAL PSYSNEVILM LHATTLAFTA TVPDILKVTR DVNSATYASF QAYGIAAALY AVVVFALIWL FRRMEARWLA YLRPQGH
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