| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1413 |
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| Symbol | oxdD |
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| ID | 4888083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | + |
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| Start bp | 1323355 |
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| End bp | 1324611 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640131352 |
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| Product | oxalate decarboxylase |
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| Protein accession | YP_001062410 |
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| Protein GI | 126445229 |
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| COG category | [G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2140] Thermophilic glucose-6-phosphate isomerase and related metalloenzymes |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03404] bicupin, oxalate decarboxylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00642683 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAATC TGTCCCGACG CAAGATGCTC GCCGGCACGG CCGGCGCGCT CGCCGCCGCC
GGCATCGCCG TTTCCGCGAA GGCCGCTTCG TTCGGCAATC CGGACAGCCC GGCCGAGGGC
GCGGTGAACG CGCGCAATCC GCAAAGCCTG ACCGATCCGG GGCCGCAAAA TCCGGCGCTG
ATGAAGGAGT TTCCTTCGTT TCAGAGTCCG CCGGCCACCG ACATTAACGG CATGCCGATT
TTCTGGGCGT CGTTCAATAA TGCGCACAAG CGCATTCAGA ACGGCGGCTG GGCGCGCGAA
GTCACGCAGG AGGATTTCGC GATTTCCGAA ACGATTTCCG GCGTCAACAT GCGGCTCGCG
CGCGGCGGCA TTCGCGAGAT GCACTGGCAC CAGCAGGCCG AATGGGCGTT CATGCTCGAC
GGCCGCTGCC GGATCACCGT GCTCGATGAA GAGGGGCGGC CGTCCGTGCA GGACGTGAAG
ACGGGCGACC TCTGGTATTT CCCGCCGGGG CTGCCGCATT CGCTGCAGGG GCTCGGCGTC
GACGGCGCCG AATTCCTGCT CGCGTTCGAC AACGGCCGCG CGTCCGAATT CAACACGCTG
CTCGTGACGG ACTGGATCGC GCACACGCCG CCCGACGTGC TCGCGCTGAA CTTCGGCGTG
CCCGCCGATG CATTCCGCCG CATTCCGCTC GACAATCTGT GGATCTTCCA GGGCGACGAT
CCCGGGCCGC TCGCCGCCGC GCAGCGCGCG TCGGCGTCGT CGCGCGGCGC GCCGAAGCAT
CCGTTCATCT TCTCGATGGG CGACATGAAG CCGAACGTGA AGACGCGCGG CGGCGAAGTG
CGGATTGTCG ACAGCACGAA CTTCGCTGTG TCGAAGACGA TCGCGGCCGC GCTCGTCACG
GTGAAGCCGG GCGGCATGCG CGAGCTGCAC TGGCACCCGA ACGCGGACGA GTGGCAGTAC
TACATCCGGG GCGACGCGCG CATGACGGTG TTCGACACCG GCCCGAAGGC GCAGACGGCC
GATTTCCGCG CGGGCGACGT CGGCTACGTG AAGAAGAGCC TCGGCCACTA CGTGCAGAAC
ACGGGCACGA CCGATCTCGT GTTCCTCGAG ATCTTCAAGG CGGACCGCTA CGCGGAGGTT
TCGCTGTCCG ACTGGCTCGC GCACACGCCG CCGCAGCTCG TCGAGGCGCA TCTGCATATC
GCGCCCGACG TGATCGCGCG CTTTCCGCGC AACCGGCCGG ACGTCGTGCC GGCGTAA
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| Protein sequence | MTNLSRRKML AGTAGALAAA GIAVSAKAAS FGNPDSPAEG AVNARNPQSL TDPGPQNPAL
MKEFPSFQSP PATDINGMPI FWASFNNAHK RIQNGGWARE VTQEDFAISE TISGVNMRLA
RGGIREMHWH QQAEWAFMLD GRCRITVLDE EGRPSVQDVK TGDLWYFPPG LPHSLQGLGV
DGAEFLLAFD NGRASEFNTL LVTDWIAHTP PDVLALNFGV PADAFRRIPL DNLWIFQGDD
PGPLAAAQRA SASSRGAPKH PFIFSMGDMK PNVKTRGGEV RIVDSTNFAV SKTIAAALVT
VKPGGMRELH WHPNADEWQY YIRGDARMTV FDTGPKAQTA DFRAGDVGYV KKSLGHYVQN
TGTTDLVFLE IFKADRYAEV SLSDWLAHTP PQLVEAHLHI APDVIARFPR NRPDVVPA
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