Gene BURPS668_A1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A1374 
Symbol 
ID4887584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp1290917 
End bp1292071 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content65% 
IMG OID640131313 
Productouter membrane porin 
Protein accessionYP_001062371 
Protein GI126444095 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC ACGTCATTTC CGCAGCCGCA TTGCTGGCCT TCGCCGCGCC GGTTTTCGCC 
CAAAGCAGCG TCACGCTGTA CGGCGTGATC GACGAAGGCT TCAACTACAC GAGCAACGTG
AACGTCAACG GCGTCGGCAA GAGCAACTAC CAGCTCGCGA GCGGTTTCGT GCAGGGCAGC
CGCTGGGGCC TGCGCGGCTC GGAAGACCTG GGCGGCGGCC TGAAAGCCAT CTTCACGCTC
GAAAACGGTT TCGACGTGAA CAACGGCCGG CTCGGCCAGG GCGGCCGGAT GTTCGGCCGC
CAGGCGTTCG TCGGCCTGTC GCACGCGCAA TACGGCTCGC TCACGCTCGG CCGCCAGTAC
GATTCGCTCG TCGACTACCT CGCGCCGTTG ACCGCGAACG GCAACTGGGG CGGCACGCTG
TTCTCGCATC CGTTCGACAA CGACAACACG GACAACTCGT TCCGCGTGAA CAACACGGTC
AAGTACGCGA GCCCGGACTG GAACGGTCTG CAAGTCGGCG GCACGTACAG CTTCAGCAAC
GCGACGGGCT TCTCGAACAA CCGCCAGTAC AGCATCGGCG CCGCGTACAC GCTGGGCGGC
CTGCAACTTG CGGCCGCGTA CCTGCAGGCG AACAACCCGG GCAAGACGGC GGGCGGCGCG
ATCGCCGACA ACGACGCGAA CTTCACGGCG GACCGCCTGC GCATCTTCGG CGGCGGCGTC
AACTACACGT TCGGCCCGGC GACGGTCGGT TTCGTCTACA CGAAGACCGA CGTGAAGAAC
CCGGTCTCGA CGGTCTATCT GCCGACGGCG ACGTTCGCGG GCCTCGGCCT GAGCGCGACG
AAGTTCCAGA ACTTCGAAAT CAACGGCAAA TACCAGCTGA CGCCGGCGCT CTTCATCGGC
GCGCAGTACG TGTACACGGA CGGCAAGTTC GATGCGGCCG CGGGCAGCGT CAAGCCGAAG
TACCACACGG TCGGCCTGAT GGCGGACTAC AACCTGTCGA AGCGCACCGA CGTCTATCTG
CAGGGCGCGT ACCAGAAGGT CGCGGGCGAC AAGACGGGCA CGATCGCGGA TGGCGGCTAC
GTCGTCGGGA CGGACGGCCC CTCGGCGTCG GCGAACCAGT TCGCGGTTCG CGCGGCGATC
CGTCACAAGT TCTGA
 
Protein sequence
MKKHVISAAA LLAFAAPVFA QSSVTLYGVI DEGFNYTSNV NVNGVGKSNY QLASGFVQGS 
RWGLRGSEDL GGGLKAIFTL ENGFDVNNGR LGQGGRMFGR QAFVGLSHAQ YGSLTLGRQY
DSLVDYLAPL TANGNWGGTL FSHPFDNDNT DNSFRVNNTV KYASPDWNGL QVGGTYSFSN
ATGFSNNRQY SIGAAYTLGG LQLAAAYLQA NNPGKTAGGA IADNDANFTA DRLRIFGGGV
NYTFGPATVG FVYTKTDVKN PVSTVYLPTA TFAGLGLSAT KFQNFEINGK YQLTPALFIG
AQYVYTDGKF DAAAGSVKPK YHTVGLMADY NLSKRTDVYL QGAYQKVAGD KTGTIADGGY
VVGTDGPSAS ANQFAVRAAI RHKF