| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1327 |
|---|
| Symbol | |
|---|
| ID | 4886777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 1251622 |
|---|
| End bp | 1252923 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640131266 |
|---|
| Product | methionine gamma-lyase |
|---|
| Protein accession | YP_001062324 |
|---|
| Protein GI | 126442498 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.403153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTATT CGAGCTATCA CAAGAAGGAT ATCGAGGGCC GTCCGCTGCA CCCGGAAACG
CAGATGATGT CGTACGGATT CGATCCGTTC TTGTCCGAAG GTGCGGTGAA GCCTCCGGTA
TTCCTCACGT CGACGTTCGC GTTCCGCTCG GCGGAGGACG GCGCCGATTT CTTCGATATC
GTCTCGGGCC GCAAGCCGTT GCCGCAGGGC GAGGCGGCGG GCCTCGTCTA CAGCCGCTTC
AATCATCCGA ATCTCGAGAT CGTCGAGGAT CGCCTCGCGC TGCTCGACGG CTCCGAGGCG
GCCGTCGTCA CGTCGAGCGG GATGTCGGCG ATCAGCGCGA TCTTTCTCGC GTTCCTGCGG
CCGGGCGATC AGCTCGTGCA ATCGGTGCCG CTGTACGGCG GCACGGAAAC GCTGATCGCG
AAATACTTCC GCGAATGGGG TGTCGGCGCG CATTCGATCG ACAACGGTCT GTCGCCGCAA
GCGATCGGCG CGGCGCTTGA AGCCGCCGCG CAGCAGGGGC CCGTGCGGCT CTGCTACGTC
GAGACGCCGG CGAATCCGAC GAACGCGCTG ATCGACCTCG ACGGCATGCG CCGCGAGCTC
GACGCGTTCG AGGCGCGACA CGGCTATCGT CCGATTTCGG TGTGCGACAA CACGCTGCTC
GGGCCGATCT TCCAGAAGCC GAGCGAGCAC GGCGTCGACA TGTCGGTGTA CTCGCTGACC
AAGTACGTCG GCGGCCACAG CGATCTCGTC GGGGGCGGCG TGACGGGGCG GCGGGATCTC
GTCGCGAAGG TCCGCGCGGT GCGCAGCGCA TTCGGCTCGC AGCTCGATCC GCATTCGTCG
TGGATGCTGA TCCGTTCGAT GGAAACGGTC GTGCTGCGGA TGAAGCAGGC GGCGCGCACC
GCGTCGGCGG TCGCGAAGTG GCTCGCGACG AATCCGCATC AGAAGGTCGA CGTGTACCAC
CCGGAGCTGA TCGTCGACGA TGCGTATCAG GCCGTGTACA AGCGGCAATG CACGGGCGCC
GGCTCGACGT TCGCGTTCGT GCTGAACGGC GGCCGCGCGG AAGCATTCCG CTTCATCAAC
GCGTTGCATC TGTTCAAGTC CGCGGTGAGT CTCGGCGGCA CCGAATCGTT GATCTGCCAT
CCGGCGTCGA CGACGCACTC CGGCGTGCCG GAGGCGGCGC GCAAGGCGGC GGGCGTGTCG
GAAGGGTTGA TTCGCGTGTC GATCGGGCTC GAGCACGAGG AGGACCTGAT CGCCGATCTC
GATCACGCGT TTCGCCGGTC CGGCCTCGCG ACGGGCGGCT GA
|
|---|
| Protein sequence | MTYSSYHKKD IEGRPLHPET QMMSYGFDPF LSEGAVKPPV FLTSTFAFRS AEDGADFFDI
VSGRKPLPQG EAAGLVYSRF NHPNLEIVED RLALLDGSEA AVVTSSGMSA ISAIFLAFLR
PGDQLVQSVP LYGGTETLIA KYFREWGVGA HSIDNGLSPQ AIGAALEAAA QQGPVRLCYV
ETPANPTNAL IDLDGMRREL DAFEARHGYR PISVCDNTLL GPIFQKPSEH GVDMSVYSLT
KYVGGHSDLV GGGVTGRRDL VAKVRAVRSA FGSQLDPHSS WMLIRSMETV VLRMKQAART
ASAVAKWLAT NPHQKVDVYH PELIVDDAYQ AVYKRQCTGA GSTFAFVLNG GRAEAFRFIN
ALHLFKSAVS LGGTESLICH PASTTHSGVP EAARKAAGVS EGLIRVSIGL EHEEDLIADL
DHAFRRSGLA TGG
|
|---|
| |