Gene BURPS668_A1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A1313 
SymbolilvB 
ID4888117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp1236596 
End bp1238269 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content71% 
IMG OID640131252 
Producthypothetical protein 
Protein accessionYP_001062310 
Protein GI126444379 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0237102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAACC CAACCACGAC CACGGTCGGC GAGCTGATTG CCGCCTTCCT CGAACAATGC 
GGCGTGAAGA CCGCCTTCGG CGTGATCTCG ATTCACAACA TGCCGATCCT CGACGCGATC
CACACGCGCG GCAAGATCCG CTATGTCGGC GCGCGCGGCG AGGCGGGCGC CGTCAACATG
GCCGACGGCC TCGCGCGCGT GTCGGGCGGG CTCGGCGTCG CGTTCACGAG CACGGGCACC
GCGGCGGGCA ACGCGGCGGG CGCGATGGTC GAGGCGCTGA CGGCCGGCAC CGCGCTCGTG
CACATCACCG GGCAGATCGA GACGCCGTAC CTCGATCAGG ACCTCGCGTA CATCCACGAA
GCGCCCGACC AACTGTCGAT GCTCAACGCG ATCTCGAAGG CCGCGTATCG CGTGCGCACG
GTCGAAGCCG TACTGCCGAC GATCCGCGAG GCGGTGCGCG TCGCGATGAC CGCGCCGAGC
GGGCCCGTGT CGGTCGAAAT TCCGATCGAC ATCCAGGCGG CCGAAATCGA GTGGCCGGAC
GATCTCGCGC CGCCTCACGT GGCGGTGCGC GAGCACGACA GCGCGCGCGT CGCGCAGCTC
GCCGAGCGTC TGGCGGGCGC GCGCCGGCCG CTGCTGTGGC TGGGCGGCGG CGCGCGGCAC
GCGCGCGCGG AAGTCGAGCG GCTCGTCGCA CTCGGCTTCG GCGTGGTCAC GAGCGTGCAG
GGGCGCGGCG TGCTGCCGGA GGATCACCCG GCGACGCTCG GCGCGTTCAA CGTGCACGCG
GCCGTCGAGC ACTTCTACAA GACGTGCGAT GCGGTCGTCG TCGTCGGCTC GCGGCTGCGC
GGCAACGAGA CGCTGAAGTA CAAGCTCGCG CTGCCGCGTC CGTTGTTCCG CGTCGACGCC
GACGCGCTCG CCGACAACCG CGGCTACCGC AACGATCTGT TCGTGCACGG CGACGCGAAG
CGCGTGCTCG CGGAGCTCGC GGATCGGCTC GAAGGCCGGC TCGCGATCGA CCCGCGCTTC
GCCGACGATC TCGCGGCCGC GCGCGCGGCG GCCGTCGCCG ACGTCGGCAA GGGGCTCGGC
CCGTACAAGC GCCTTGTCGA CACGCTGCAG CAGGCGCTCG GACGCGACTA CAACTGGGTG
CGCGACGTGA CGATCTCGAA CAGCACGTGG GGCAACCGCC TGCTCAGGAT CTTCGAGCCG
CGCGCGGGCG TGCACGCGTT GGGCGGCGGA ATCGGCCAGG GGATGCAGAT GGCGATCGGC
GCGGCGCTCG CCGGCAACGC GGCGAAGACG GTGTGCCTCG TCGGCGACGG CGGCCTGATG
GTCAACGTCG GCGAGCTCGC GACCGCCGTG CAGGAGAACG CGAACGTGAT GATCGTGCTG
ATGAACGACC AGTGCTACGG GGTGATCCGC AACATCCAGG ACGCGCAGTA CGGCGGGCGG
CGCTGTTACG TCGAGCTGCA TCAGCCGGAT TTCGCGCAGT TCTGCGCGAG CCTGAAACTC
GCGCATCACC GGATCACGTC GCTCGACGAC GCGGAGCGCA TCGTGCGCGA GGGGCTCGCG
CACGAGGGGC CGGTGCTCGT CGAAGTCGAC ATGCTGTCGG TCGGCTCGTT CGCGGCCGCG
TTCGCCGGCC CCCCCGTCAA GAAGGACACG CCCGCGGAGC GCCAGTATGC GTAA
 
Protein sequence
MSNPTTTTVG ELIAAFLEQC GVKTAFGVIS IHNMPILDAI HTRGKIRYVG ARGEAGAVNM 
ADGLARVSGG LGVAFTSTGT AAGNAAGAMV EALTAGTALV HITGQIETPY LDQDLAYIHE
APDQLSMLNA ISKAAYRVRT VEAVLPTIRE AVRVAMTAPS GPVSVEIPID IQAAEIEWPD
DLAPPHVAVR EHDSARVAQL AERLAGARRP LLWLGGGARH ARAEVERLVA LGFGVVTSVQ
GRGVLPEDHP ATLGAFNVHA AVEHFYKTCD AVVVVGSRLR GNETLKYKLA LPRPLFRVDA
DALADNRGYR NDLFVHGDAK RVLAELADRL EGRLAIDPRF ADDLAAARAA AVADVGKGLG
PYKRLVDTLQ QALGRDYNWV RDVTISNSTW GNRLLRIFEP RAGVHALGGG IGQGMQMAIG
AALAGNAAKT VCLVGDGGLM VNVGELATAV QENANVMIVL MNDQCYGVIR NIQDAQYGGR
RCYVELHQPD FAQFCASLKL AHHRITSLDD AERIVREGLA HEGPVLVEVD MLSVGSFAAA
FAGPPVKKDT PAERQYA