Gene BURPS668_A1292 details

Gene Information

• Locus tag: BURPS668_A1292
• Symbol: ribA
• ID: 4886775
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009075
• Strand: +
• Start bp: 1220377
• End bp: 1221030
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640131230
• Product: GTP cyclohydrolase II
• Protein accession: YP_001062288
• Protein GI: 126444497
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0807] GTP cyclohydrolase II
• TIGRFAM ID: [TIGR00505] GTP cyclohydrolase II

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.0651552
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTCTT CGCATCCTGA CTCGCCGCAG CCGGACGACG GCGCCGCGCC CGAGTGCGTG 
ACGCTCGTCG CCACCGCGAC GCTTCCTACC CGCTACGGCA CGTTCACGTC GTATGCGTTT 
CGCGTGGCGG GCGGCGATGC CGAGCACCTC GCGCTCGTGA TGGGCGACGT CGCCGAGCAG 
CCGTCGGTGC TGACGCGGCT TCATTCCGAG TGCCTGACGG GCGACGTGTT CGGCTCGTAT 
CGATGCGATT GCGGCGAGCA GCTCGATCTC TCGCTGCGCT ACATCGCGGC CGAAGGGCGC 
GGCGTATTGC TGTATCTGCG CGGCCACGAA GGCCGCGGGA TCGGCCTGAG CAACAAGATC 
CGCGCGTATG CGCTGCAGGA GCAGGGGCGC GACACCGTCG AGGCGAACCT CGACCTTGGG 
CTACCCGACG ACGCGCGCGA ATACGATTCC GCCGCCGCGA TCCTGCGCAT CCTGAAAGTC 
ACGTCCGTGC GACTGATGAG CAATAATCCG AAGAAGTTCG ACACGCTCGC GCGGCACGGT 
ATCCCGGTCT GCGAGCGCGT CGCGCTCGCC GTGCCTGTGC GCGAGGAGAA CGAGCGCTAT 
ATCCGCACGA AGCAGCTCAA GTTCGGCCAC TATTATTTCG ACGAAAACGA ATAG 

 

Protein sequence

MKSSHPDSPQ PDDGAAPECV TLVATATLPT RYGTFTSYAF RVAGGDAEHL ALVMGDVAEQ 
PSVLTRLHSE CLTGDVFGSY RCDCGEQLDL SLRYIAAEGR GVLLYLRGHE GRGIGLSNKI 
RAYALQEQGR DTVEANLDLG LPDDAREYDS AAAILRILKV TSVRLMSNNP KKFDTLARHG 
IPVCERVALA VPVREENERY IRTKQLKFGH YYFDENE